MouseCHD Napari plugin

MouseCHD is a pipeline for heart segmentation and detection of mouse congenital heart defects. This dataset include assets os MouseCHD Napari plugin:

• HeartSeg.zip: heart segmentation model with nnunetv1 (https://zenodo.org/records/13785314)
• HeartSegV2.zip: heart segmentation model with nnunetv2 (https://zenodo.org/records/13824579)
• Classifier.zip: configuration and model for classification model (https://zenodo.org/records/13785314)
• assets.zip: images and sample for MouseCHD plugin on Napari (https://zenodo.org/records/13785938)

Preprint: https://www.biorxiv.org/content/10.1101/2024.04.06.588383v1.abstract

Code: https://github.com/hnguyentt/MouseCHD

Plugin code: https://github.com/hnguyentt/mousechd-napari