Published September 20, 2024
| Version v4
Model
Open
MouseCHD Napari plugin
Authors/Creators
-
1.
Institut Pasteur
Description
MouseCHD is a pipeline for heart segmentation and detection of mouse congenital heart defects. This dataset include assets os MouseCHD Napari plugin:
- HeartSeg.zip: heart segmentation model with nnunetv1
- HeartSegV2.zip: heart segmentation model with nnunetv2
- Classifier.zip: configuration and model for classification model
- assets.zip: images and sample for MouseCHD plugin on Napari
Preprint: https://www.biorxiv.org/content/10.1101/2024.04.06.588383v1.abstract
Code: https://github.com/hnguyentt/MouseCHD
Plugin code: https://github.com/hnguyentt/mousechd-napari
Files
HeartSegV2.zip
Files
(1.2 GB)
| Name | Size | Download all |
|---|---|---|
|
md5:388235360f5c2e62b692c7290a6cc9dc
|
1.2 GB | Preview Download |
Additional details
Software
- Repository URL
- https://github.com/hnguyentt/mousechd-napari
- Programming language
- Python
- Development Status
- Active