The Network of European Bioimage Analysts

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Published September 10, 2024 | Version v0.7
Software Open

Gut Analysis Toolbox

Creators

Description

What's Changed

  • Updating User Dialogs by @mattyrowey in https://github.com/pr4deepr/GutAnalysisToolbox/pull/18
  • Added Dialog Boxes and Grammar Corrections by @mattyrowey in https://github.com/pr4deepr/GutAnalysisToolbox/pull/19
  • Updated Dialog Prompts for Clarity by @mattyrowey in https://github.com/pr4deepr/GutAnalysisToolbox/pull/20
  • Batch analysis option added.
  • fixed a bunch of bugs related to ganglia segmentation and user workflow

New Contributors

  • @mattyrowey made their first contribution in https://github.com/pr4deepr/GutAnalysisToolbox/pull/18

Full Changelog: https://github.com/pr4deepr/GutAnalysisToolbox/compare/v0.6...v0.7

Notes

If you use this software, please cite it as below.

 

Luke Sorensen, Adam Humenick, Sabrina S. B. Poon, Myat Noe Han, Narges S. Mahdavian, Matthew C. Rowe, Ryan Hamnett, Estibaliz Gómez-de-Mariscal, Peter H. Neckel, Ayame Saito, Keith Mutunduwe, Christie Glennan, Robert Haase, Rachel M. McQuade, Jaime P. P. Foong, Simon J. H. Brookes, Julia A. Kaltschmidt, Arrate Muñoz-Barrutia, Sebastian K. King, Nicholas A. Veldhuis, Simona E. Carbone, Daniel P. Poole, Pradeep Rajasekhar; Gut Analysis Toolbox: Automating quantitative analysis of enteric neurons. J Cell Sci 2024; jcs.261950. doi: https://doi.org/10.1242/jcs.261950

Files

pr4deepr/GutAnalysisToolbox-v0.7.zip

Files (233.2 MB)

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Additional details

Related works

Is supplement to
Software: https://github.com/pr4deepr/GutAnalysisToolbox/tree/v0.7 (URL)