Published September 5, 2024 | Version v1
Dataset Open

Isoform analysis Galaxy training with EWS-FLI1 example

  • 1. ROR icon École Polytechnique Fédérale de Lausanne

Description

The fastqs are subsampled from the following SRA:


SRR8561337
SRR8561334
SRR8561335
SRR8561332
SRR8561333
SRR8561347

The gtf file was reduced from https://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_human/release_19/gencode.v19.annotation.gtf.gz and only lines with 'chr10' in first column were kept.

The fasta file comes from https://hgdownload.soe.ucsc.edu/goldenPath/hg19/chromosomes/chr10.fa.gz

Files

Files (3.5 GB)

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md5:fe6d31e53f9719b5790ea065e94e896a
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md5:6f3910994d303e4e1d974a67159afbb1
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99 Bytes Download
md5:42d27e1e8e415a37ac2230f6c02ec78b
41.5 MB Download
md5:170d2e58df7cdd1b7b4f1f155b97341e
138.2 MB Download