Published September 3, 2024 | Version v1
Taxonomic treatment Open

Colletotrichum siamense Prihastuti, L. Cai & K. D. Hyde

  • 1. State Key Laboratory of Efficient Production of Forest Resources, Beijing Forestry University, Beijing 100083, China
  • 2. Key Laboratory for Silviculture and Conservation of the Ministry of Education, Beijing Forestry University, Beijing 100083, China
  • 3. Ankang Forestry Technology Promotion Centre, Ankang, Shaanxi 725099, China

Description

Colletotrichum siamense Prihastuti, L. Cai & K. D. Hyde, Fungal Divers. 39: 98 (2009)

Materials examined.

China. • Sichuan Province, Guangyuan City, Chaotian District, Zhongzi Town, 32 ° 41 ' 05 " N, 106 ° 02 ' 08 " E, from leaf of Juglans regia L., 10 Oct. 2023, Y. X. Li, L. Lin & X. L. Fan (BJFC - S 2231, living culture CFCC 59601; BJFC - S 2233, living culture CFCC 59625; BJFC - S 2235, living culture CFCC 59964); • 32 ° 41 ' 34 " N, 106 ° 02 ' 23 " E, from leaf of Juglans regia L., 10 Oct. 2023, Y. X. Li, L. Lin & X. L. Fan (holotype BJFC - S 2234, living culture CFCC 59909)

Notes.

Colletotrichum siamense was first described as a species in association with Coffea arabica by Prihastuti et al. (2009). The broader concept of C. siamense sensu lato has been a subject of considerable debate, as noted by Weir et al. (2012) and Sharma et al. (2015), due to the application of the Genealogical Concordance Phylogenetic Species Recognition (GCPSR) approach. Liu et al. (2016) concluded that C. siamense is a single species, not a species complex. Based on phylogenetic evidence, Zhang et al. (2022) proposed that C. menglaense, C. pandanicola, and C. parvisporum are synonyms of C. siamense. More recent studies have further synonymized the closely related species C. rhizophorae and C. thailandica with C. siamense, considering morphological characteristics, phylogenetic analyses, and GCPSR (Aumentado et al. 2024). In this study, C. siamense was isolated from walnut leaf spots affected by walnut anthracnose. The four isolates our study examined while forming a distinct lineage were found within the C. siamense clade in our phylogenetic analysis. Moreover, our isolate (CFCC 59909) is similar to the holotype of C. siamense (ICMP 18578). While the conidia of our isolate (CFCC 59909) are wider than strain ICMP 18578 (12.3–14.5 × 4.9–6.4 vs. 7–18.3 × 3–4.3 μm) (Prihastuti et al. 2009). Based on this evidence, we identify our isolate as C. siamense.

Notes

Published as part of Li, Yixuan, Lin, Lu, Cao, Jing, Gan, Mingxu & Fan, Xinlei, 2024, Three new species of Colletotrichum (Glomerellales, Glomerellaceae) associated with walnut (Juglans regia) anthracnose from China, pp. 147-167 in MycoKeys 108 on pages 147-167, DOI: 10.3897/mycokeys.108.125382

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Linked records

Additional details

Biodiversity

Collection code
BJFC
Material sample ID
S 2231, CFCC 59601, S 2233, CFCC 59625, S 2235, CFCC 59964 , S 2234, CFCC 59909
Event date
2023-10-10
Verbatim event date
2023-10-10
Scientific name authorship
Prihastuti, L. Cai & K. D. Hyde
Kingdom
Fungi
Phylum
Ascomycota
Order
Botryosphaeriales
Family
Botryosphaeriaceae
Genus
Colletotrichum
Species
siamense
Taxon rank
species
Type status
holotype

References

  • Prihastuti H, Cai L, Chen H, McKenzie EHC, Hyde KD (2009) Characterization of Colletotrichum species associated with coffee berries in Northern Thailand. Fungal Diversity 39 (1): 89–109.
  • Weir BS, Johnston PR, Damm U (2012) The Colletotrichum gloeosporioides species complex. Studies in Mycology 73: 115–180. https://doi.org/10.3114/sim0011
  • Sharma G, Pinnaka AK, Shenoy BD (2015) Resolving the Colletotrichum siamense species complex using ApMat marker. Fungal Diversity 71 (1): 247–264. https://doi.org/10.1007/s13225-014-0312-7
  • Liu F, Wang M, Damm U, Crous PW, Cai L (2016) Species boundaries in plant pathogenic fungi: A Colletotrichum case study. BMC Evolutionary Biology 16 (1): 81. https://doi.org/10.1186/s12862-016-0649-5
  • Zhang Q, Nizamani MM, Feng Y, Yang YQ, Jayawardena RS, Hyde KD, Wang Y, Li C (2022) Genome-scale and multi-gene phylogenetic analyses of Colletotrichum spp. host preference and associated with medicinal plants. Mycosphere 14 (2): 1–106. https://doi.org/10.5943/mycosphere/14/si2/1
  • Aumentado HDR, Armand A, Phukhamsakda C, Hyde KD, Jones EG, Jayawardena RS (2024) Polyphasic identification of two novel Colletotrichum species causing leaf spots on mangroves in Thailand. European Journal of Plant Pathology 169 (1): 1–27. https://doi.org/10.1007/s10658-024-02819-y