Published September 18, 2015 | Version v1
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Muriphaeosphaeria galatellae gen. et sp. nov. in Phaeosphaeriaceae (Pleosporales)

  • 1. Institute of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand & School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
  • 2. Academy of Biology and Biotechnology (Department of Biological Sciences), Southern Federal University, Rostov-on-Don 344090, Russia
  • 3. Germplasm Bank of Wild Species in Southwest China, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China
  • 4. Formerly Department of Botany, Goa University, Goa, India; No. 128/1-J, Azad Housing Society, Curca, Goa Velha, India
  • 5. Department of Botany and Microbiology, King Saudi University, Riyadh, Saudi Arabia
  • 6. Institute of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand & School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand & Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China & Department of Botany and Microbiology, King Saudi University, Riyadh, Saudi Arabia

Description

Phukhamsakda, Chayanard, Ariyawansa, Hiran A., Phookamsak, Rungtiwa, Chomnunti, Putarak, Bulgakov, Timur S., Yang, Jun-Bo, Bhat, Darbhe J., Bahkali, Ali H., Hyde, Kevin D. (2015): Muriphaeosphaeria galatellae gen. et sp. nov. in Phaeosphaeriaceae (Pleosporales). Phytotaxa 227 (1): 55-65, DOI: 10.11646/phytotaxa.227.1.6, URL: http://dx.doi.org/10.11646/phytotaxa.227.1.6

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urn:lsid:plazi.org:pub:FB70FF91FFDDFFADFFD7FFBF9211FFD5
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References

  • Ariyawansa, H.A., David, L.H., Hyde, K.D., Jones, E.B.G., Maharachchikumbura, S.S.N., Manamgoda, D.S., Thambugala, K.M., Udayanga D., Camporesi, E., Daranagama, A., Jayawardena, R., Liu, J.K., McKenzie, E.H.C., Phookamsak, R., Senanayake, I.C., Shivas, R.G., Tian, Q. & Xu, J.-C. (2014a) Epitypification and neotypification: guidelines with appropriate and inappropriate examples. Fungal Diversity 69: 57-91. http://dx.doi.org/10.1007/s13225-014-0315-4
  • Ariyawansa, H.A., Tanaka, K., Thambugala, K.M., Phookamsak, R., Tian, Q., Camporesi, E., Hongsanan, S., Monkai, J., Wanasinghe, D.N., Mapook, A., Chukeatirote, E., Kang, J.C., Xu, J.-C., Mckenzie, E.H.C., Jones, E.B.G. & Hyde, K.D. (2014b) A molecular phylogenetic reappraisal of the Didymosphaeriaceae (= Montagnulaceae). Fungal Diversity 68: 69-104. http://dx.doi.org/10.1007/s13225-014-0305-6
  • Ariyawansa, H.A., Thambugala, K.M, Manamgoda, D.S., Jayawardena, R., Camporesi, E., Boonmee, S., Wanasinghe, D.N., Phookamsak, R., Hongsanan, S., Singtripop, C., Chukeatirote, E., Kang, J.C., Jones, E.B.G. & Hyde, K.D. (2015) Towards a natural classification and backbone tree for Pleosporaceae. Fungal Diversity 71: 85-139. http://dx.doi.org/10.1007/s13225-015-0323-z
  • Ariyawansa, H.A., Thambugala, K.M., Kang, J.C., Alias, S.A., Chukeatirote, E. & Hyde, K.D. (2014c) Towards a natural classification of Dothideomycetes 2: The genera Cucurbidothis, Heterosphaeriopsis, Hyalosphaera, Navicella and Pleiostomellina (Dothideomycetes incertae sedis). Phytotaxa 176 (1): 7-17. http://dx.doi.org/10.11646/phytotaxa.176.1.4
  • Barr, M.E. (1979) A classification of Loculoascomycetes. Mycologia 71: 935-957. http://dx.doi.org/10.2307/3759283
  • Berbee, M.L. (1996) Loculoascomycete origins and evolution of filamentous ascomycete morphology based on 18s rRNA gene sequence data. Molecular Biology and Evolution 13: 462-670. http://dx.doi.org/10.1093/oxfordjournals.molbev.a025607
  • Camara, M.P., Palm, M.E., Van-Berkum, P. & O'neill, N.R. (2002) Molecular phylogeny of Leptosphaeria and Phaeosphaeria. Mycologia 94: 630-640. http://dx.doi.org/10.2307/3761714
  • Chomnunti, P., Hongsanan, S., Hudson, B.A., Tian, Q., Peroh, D., Dhami, M.K., Alias, A.S., Xu, J., Liu, X., Stadler, M. & Hyde, K.D. (2014) The Sooty Moulds. Fungal Diversity 66: 1-36. http://dx.doi.org/10.1007/s13225-014-0278-5
  • Crous, P.W., Bernard, S., Michael, J.W., John, R., Walter, F.O.M., Alan, J.L.P., Artur, A., Treena, B., Paul, B. & Johannes, Z.G. (2006) Phylogenetic lineages in the Botryosphaeriaceae. Studies in mycology 55: 235-253. http://dx.doi.org/10.3114/sim.55.1.235.
  • Guindon, S., Dufayard, J.F., Lefort, V., Anisimova, M., Hordijk, W., & Gascuel, O. (2010). New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Systematic biology 59 (3):307-321. http://dx.doi.org/10.1093/sysbio/syq010
  • Gupta, V.K. & Tuohy, M.G. (2013) Laboratory Protocols in Fungal Biology. Springer New York, London, England, pp. 114-115. http://dx.doi.org/10.1007/978-1-4614-2356-0
  • Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41: 95-98.
  • Huelsenbeck, J.P. & Ronquist, F. (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755. http://dx.doi.org/10.1093/bioinformatics/17.8.754
  • Hyde, K.D., Jones, E.B.G., Liu, J.K, Ariyawansa, H., Boehm, E., Boonmee, S., Braun, U., Chomnunti, P., Crous, P.W., Dai, D.Q., Diederich, P., Dissanayake, A., Doilom, M., Doveri, F., Hongsanan, S., Jayawardena, R., Lawrey, J.D., Li, Y.M., Liu, Y.X., Lucking, R., Monkai, J., Muggia, L., Nelsen, M.P., Pang, K.L., Phookamsak, R., Senanayake, I.C., Shearer, C.A., Suetrong, S., Tanaka, K., Thambugala, K.M., Wijayawardene, N.N., Wikee, S., Wu, H.X., Zhang, Y., Aguirrehudson, B., Alias, S.A., Aptroot, A., Bahkali, A., Bezerra, J.L., Bhat, D.J., Camporesi, E., Chukeatirote, E., Gueidan, C., Hawksworth, D.L., Hirayama, K., Hoog, S.D., Kang, J.C., Knudsen, K., Li, W.J., Li, X.H., Liu, Z.Y., Mapook, A., Mckenzie, E.H.C., Miller, A.N., Mortimer, P.E., Phillips, A.J.L., Raja, H.A, Scheuer, C., Schumm, F., Taylor, J.E., Tian, Q., Tibpromma, S., Wanasinghe, D.N., Wang, Y., Xu, J.C., Yacharoen, S., Yan, J.Y. & Zhang, M. (2013) Families of Dothideomycetes. Fungal Diversity 63: 1-313. http://dx.doi.org/10.1007/s13225-013-0263-4
  • Hyde, K.D., Mckenzie, E.H.C. & Koko, T.W. (2011) Towards incorporating anamorphic fungi in a natural classification-checklist and notes for 2010. Mycosphere 2: 1-88.
  • Katoh, K., Standley, K. (2013) MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability. Molecular Biology and Evolution 30 (4): 772-780. Available from: http://mbe.oxfordjournals.org/ http://dx.doi.org/10.1093/molbev/mst010
  • Kirk, P.M., Cannon, P.F., Minter, D.W. & Stalpers, J.A. (2008) Ainsworth & Bisby's Dictionary of the Fungi, 10th edn. CABI, Wallingford, UK, pp. 221, 518, 547.
  • Liu, D. (2011) Molecular detection of human fungal pathogens. CRC Press, London, England, p. 111
  • Liu, J.K., Hyde, K.D., Jones, E.B.G., Ariyawansa, H.A., Bhat, D.J., Boonmee, S., Maharachchikumbura, S.S.N., Mckenzie, E.H.C., Phookamsak, R., Phukhamsakda, C., Shenoy, B.D., Abdel-Wahab, M.A., Buyck, B., Chen, J., Chethana, K.W.T., Singtripop, C., Dai, D.Q., Dai, Y.C., Daranagama, D.A., Dissanayake, A.J., Doilom, M., D'souza, M.J., Fan, X.L., Goonasekara, I.D., Hirayama, K., Hongsanan, S., Jayasiri, S.C., Jayawardena, R.S., Karunarathna, S.C., Li, W.J., Mapook, A., Norphanphoun, C., Pang, K.L., Perera, R.H., Persoh, D., Pinruan, U., Senanayake, I.C., Somrithipol, S., Suetrong, S., Tanaka, K., Thambugala, K.M., Tian, Q., Tibpromma, S., Udayanga, D., Wijayawardene, N.N., Wanasinghe, D., Wisitrassameewong, K., Zeng, X.Y., Abdel-Aziz, F.A., Adamcik, S., Bahkali, A.H., Boonyuen, N., Bulgakov, T., Callac, P., Chomnunti, P., Greiner, K., Hashimoto, A., Hofstetter, V., Kang, J.C., Lewis, D., Li, X.H., Liu, X.X., Liu, Z.Y., Matsumura, M., Mortimer, P.E., Rambold, G., Randrianjohany, E., Sato, G., Sri-Indrasutdhi, V., Tian, C.M., Verbeken, A., Brackel, W.V., Wang, Y., Wen, T.C., Xu, J.C., Yan, J.Y., Zhao, R.L. & Camporesi, E. (2015) Fungal Diversity Notes 1-110: Taxonomic and phylogenetic contributions to fungal species. Fungal Diversity 72: 1-197. http://dx.doi.org/10.1007/s13225-015-0324-y
  • Nylander, J.A.A. (2004) MrModeltest 2.0. Program distributed by the author. Evolutionary Biology Centre, Uppsala University
  • O'meara, B.C.,Ane, C., Sanderson, M.J. & Wainwright, P.C. (2006) Testing for different rates of continuous trait evolution using likelihood. Evolution 60: 922-933. http://dx.doi.org/10.1111/j.0014-3820.2006.tb01171.x
  • Phookamsak, R., Liu, J.K., Chukeatirote, E., Mckenzie, E.H.C. & Hyde K.D. (2013) Phylogeny and morphology of Leptosphaerulina saccharicola sp. nov. and Pleosphaerulina oryzae and relationships with Pithomyces. Cryptogamie Mycologie 34: 303-319. http://dx.doi.org/10.7872/crym.v34.iss4.2013.303
  • Phookamsak, R., Liu, J.K., Manamgoda, D.S., Chukeatirote, E., Mckenzie, E.H.C. & Hyde, K.D. (2014a) The sexual state of Setophoma. Phytotaxa 176: 260-269. http://dx.doi.org/10.11646/phytotaxa.176.1.25
  • Phookamsak, R., Liu, J.K., Mckenzie, E.H.C., Manamgoda, D.S., Ariyawansa, H., Thambugala, K.M., Dai, D.Q., Camporesi, E., Chukeatirote, E., Wijayawardene, N.N., Bahkali,A.H., Mortimer, P.E., Xu, J.C. & Hyde, K.D. (2014b) Revision of Phaeosphaeriaceae. Fungal Diversity 68: 159-238. http://dx.doi.org/10.1007/s13225-014-0308-3
  • Quaedvlieg, W., Verkley, G.J.M., Shin, H.D., Barreto, R.W., Alfenas, A.C., Swart, W.J., Groenewald, J.Z. & Crous, P.W. (2013) Sizing up Septoria. Studies in Mycology 75: 307-390. http://dx.doi.org/10.3114/sim0017
  • Rambaut, A. & Drummond, A. (2008) FigTree: Tree figure drawing tool, version 1.2. 2. Institute of Evolutionary Biology, University of Edinburgh
  • Rannala, B. & Yang, Z. (1996) Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. Journal of Molecular Evolution 43: 304-311. http://dx.doi.org/10.1007/BF02338839
  • Schoch, C.L., Crous, P.W., Groenewald, J.Z., Boehm, E.W.A., Burgess, T.I., De-Gruyter, J., De-Hoog, G.S., Dixon, L.J., Grube, M., Gueidan, C., Harada, Y., Hatakeyama, S., Hirayama, K., Hosoya, T., Huhndorf, S.M., Hyde, K.D., Jones, E.B.G., Kohlmeyer, J., Kruys, A., Li, Y.M., Lucking, R., Lumbsch, H.T., Marvanova, L., Mbatchou, J.S., Mcvay, A.H., Miller, A.N., Mugambi, G.K., Muggia, L., Nelsen, M.P., Nelson, P., Owensby, C.A., Phillips, A.J.L., Phongpaichit, S., Pointing, S.B., Pujade-Renaud, V., Raja, H.A., Rivas, P.E., Robbertse, B., Ruibal, C., Sakayaroj, J., Sano, T., Selbmann, L., Shearer, C.A., Shirouzu, T., Slippers, B., Suetrong, S., Tanaka, K., Volkmann-Kohlmeyer, B., Wingfield, M.J., Wood, A.R., Woudenberg, J.H.C., Yonezawa, H., Zhang, Y. & Spatafora, J.W. (2009) A class-wide phylogenetic assessment of Dothideomycetes. Studies in Mycology 64: 1-15. http://dx.doi.org/10.3114/sim.2009.64.01
  • Shoemaker, R.A. & Babcock, C.E. (1989) Phaeosphaeria. Canadian Journal of Botany 67: 1500-1599. http://dx.doi.org/10.1139/b89-199
  • Shoemaker, R.A. & Babcock, C.E. (1992) Applanodictyosporous Pleosporales: Clathrospora, Comoclathris, GraphyIlium, Macrospora, and Platysporoides. Canadian Journal of Botany 70: 1617-1658. http://dx.doi.org/10.1139/b92-204
  • Shoemaker, R.A. (1984) Canadian and some extralimital Nodulosphaeria and Entodesmium species. Canadian Journal of Botany 62: 2730-2753. http://dx.doi.org/10.1139/b84-367
  • Silvestro, D., & Michalak, I. (2011) raxmlGUI: a graphical front-end for RAxML. Organisms Diversity & Evolution 12 (4):335-337. http://dx.doi.org/10.1007/s13127-011-0056-0
  • Stamatakis, A. (2006) Raxml-vi-hpc: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. http://dx.doi.org/10.1093/bioinformatics/btl446
  • Subashini, C.J., Ariyawansa, H.A., Liu J.K., Jones, E.B.G. & Hyde, K.D. (2015) The Faces of Fungi database: Fungal names linked with morphology, molecular and human attributes, Database. Fungal Diversity (Inpress)
  • Swofford, D.L. (2002) PAUP: Phylogenetic analysis using parsimony and other methods version 4.0 b10. Sinauer Associates. Sunderland.
  • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular biology and evolution 28: 2731-2739. http://dx.doi.org/10.1093/molbev/msr121
  • Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Molecular biology and evolution 30: 2725-2729. http://dx.doi.org/10.1093/molbev/mst197
  • Taylor, J.W., Jacobson, D.J., Kroken, S., Kasuga, T., Geiser, D.M., Hibbett, D.S. & Fisher, M.C. (2000) Phylogenetic Species Recognition and Species Concepts in Fungi. Fungal Genetics and Biology 31: 21-32. http://dx.doi.org/10.1006/fgbi.2000.1228
  • Thambugala, K.M., Camporesi, E., Ariyawansa, H.A., Phookamsak, R., Liu, Z.Y. & Hyde, K.D. (2014) Phylogeny and morphology of Phaeosphaeriopsis triseptata sp. nov., and Phaeosphaeriopsis glaucopunctata. Phytotaxa 176: 238-250. http://dx.doi.org/10.11646/phytotaxa.176.1.23
  • Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of bacteriology 172: 4238-4246.
  • Wanasinghe, D.N., Jones, E.G., Camporesi, E., Boonmee, S., Karunarathna, S.C., Thines, M., Mortimer, P.E., Xu, J.-C. & Hyde, K.D. (2014) Dematiopleospora mariae gen. sp. nov., from Ononis Spinosa in Italy. Cryptogamie, Mycologie 35: 105-117. http://dx.doi.org/10.7872/crym.v35.iss2.2014.105
  • White, T.J., Bruns, T.D., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protocols: Guide Methods Application 18: 315-322. http://dx.doi.org/10.1016/B978-0-12-372180-8.50042-1
  • Wijayawardene, D.N.N., Camporesi, E., Song, Y., Dai, D.Q., Bhat, D.J., Mckenzie, E.H.C., Chukeatirote, E., Mel'nik, V.A., Wang, Y. & Hyde, K.D. (2013) Multi-gene analyses reveal taxonomic placement of Scolicosporium minkeviciusii in Phaeosphaeriaceae (Pleosporales). Cryptogamie, Mycologie 34: 357-366. http://dx.doi.org/10.7872/crym.v34.iss2.2013.357
  • Wijayawardene, D.N.N., Crous, P.W., Kirk, P.M., Hawksworth, D.L., Boonmee, S., Braun, U., Chomnunti, P., Dai, D.Q., D'souza, M.J., Diederich, P., Dissanayake, A., Doilom, M., Hongsanan, S., Jones, E.B.G., Groenewald, J.Z., Jayawardena, R., Lawrey, J.D., Liu, J.K., Lucking, R., Madrid, H., Manamgoda, D.S., Muggia, L., Nelsen, M.P., Phookamsak, R., Suetrong, S., Tanaka, K., Thambugala, K.M., Wikee, S., Zhang, Y., Aptroot, A., Ariyawansa, H.A., Bahkali, A.H., Bhat, J.D., Gueidan, C., De-Hoog, G.S., Knudsen, K., Mckenzie, E.H.C., Miller, A.N., Mortimer, P.E., Wanasinghe, D.N., Phillips,A.J.L., Raja, H.A., Slippers, B., Shivas, R.S., Taylor, J.E., Wang, Y., Woudenberg, J.H.C., Piatek, M., Cai, L., Jaklitsch, W.M. & Hyde, K.D. (2014) Naming and outline of Dothideomycetes 2014 including proposals for the protection or suppression of generic names. Fungal Diversity 69: 1-55. http://dx.doi.org/10.1007/s13225-014-0309-2
  • Zhang, Y., Crous, P.W, Schoch, C.L. & Hyde, K.D. (2012) Pleosporales. Fungal Diversity 52: 1-225. http://dx.doi.org/10.1007/s13225-011-0117-x
  • Zhang, Y., Schoch, C.L., Fournier, J., Crous, P.W., De-Gruyter, J., Woudenberg, J.H.C., Hirayama, K., Tanaka, K., Pointing, S.B. & Hyde, K.D. (2009) Multilocus phylogeny of the Pleosporales: a taxonomic, ecological and evolutionary reevaluation. Studies in Mycology 64: 85-102. http://dx.doi.org/10.3114/sim.2009.64.04
  • Zhaxybayeva, O. & Gogarten, J.P. (2002) Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses. BMC Genomics 3 (1): 4. http://dx.doi.org/10.1186/1471-2164-3-4