NCCR AntiResist
Published 2024 | Version v1
Data paper Open

Pseudomonas aeruginosa faces a fitness trade-off between mucosal colonization and antibiotic tolerance during airway infection

Authors/Creators

  • 1. École Polytechnique Fédérale de Lausanne

Description

This dataset repository contains the following items:

  1. Source data file (zip file) containing spreadsheets with the data used to make all the plots in the paper (organized by main figures and extended data figures). The file also contains the statistics results of all comparisons made in the paper. 
  2. Metabolic modeling information (zip file) containing the codes used during the analysis.
  3. Tn-seq files (zip file) containing all the wig files used in the analysis with TRANSIT (raw and aBGC-normalized) and the annotation table.
  4. Imaging data (zip file) containing the tiff files for all the images and movies displayed in the manuscript.

Files

1_source_data.zip

Files (1.3 GB)

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md5:5920011bab6375164aa9c967c151e455
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md5:e4cf4c8b45ef2a64658f1dc5785c3af2
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Additional details

Funding

Swiss National Science Foundation
NCCR AntiResist (phase I) 180541
Swiss National Science Foundation
How bacteria walk: biomechanics and mechanosensory feedbacks during Pseudomonas aeruginosa type IV pili motion 189084
European Molecular Biology Organization
Investigating how Pseudomonas aeruginosa regulates the airway environment to promote infection and antibiotic tolerance ALTF 12-2022
Swiss National Science Foundation
Models, Algorithms, Software and Repositories for Synthetic Biology and Biotechnology 188623
Swiss National Science Foundation
NCCR Microbiomes (phase I) 180575