Published August 26, 2024 | Version v1
Software Open

Dynamics of island mass effect: multi-satellite binning package

Authors/Creators

  • 1. ROR icon University of Maine

Description

Matlab satellite binning software package to create custom level-3 multi-satellite products from level-2 satellite data previously projected onto the same latitude/longitude grid. The software package performs the following successive operations:

  • nudges each satellite sensor data to best agree with in situ underway data
  • removes outliers
  • bin all satellite data at a given binning frequency
  • propagate uncertainties to the merged products

Nudging coefficients and their associated uncertainties were computed using underway in situ optical data and HPLC data collected along the entire Tara Pacific transect (see Gorsky et al. 2019 and Lombard et al. 2023).

Files

sat_binning_package.zip

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Additional details

Funding

NASA Earth Science
Ecological and physiological characteristic of the Island Mass Effect 80NSSC20K1641
U.S. National Science Foundation
Island mass effects on planktonic communities in the open ocean 2025402

Software

Programming language
MATLAB

References

  • Gorsky, G., Bourdin, G., Lombard, F., Pedrotti, M. L., Audrain, S., Bin, N., Boss, E., Bowler, C., Cassar, N., Caudan, L., Chabot, G., Cohen, N. R., Cron, D., De Vargas, C., Dolan, J. R., Douville, E., Elineau, A., Flores, J. M., Ghiglione, J. F., Haëntjens, N., Hertau, M., John, S. G., Kelly, R. L., Koren, I., Lin, Y., Marie, D., Moulin, C., Moucherie, Y., Pesant, S., Picheral, M., Poulain, J., Pujo-Pay, M., Reverdin, G., Romac, S., Sullivan, M. B., Trainic, M., Tressol, M., Troublé, R., Vardi, A., Voolstra, C. R., Wincker, P., Agostini, S., Banaigs, B., Boissin, E., Forcioli, D., Furla, P., Galand, P. E., Gilson, E., Reynaud, S., Sunagawa, S., Thomas, O. P., Thurber, R. L. V., Zoccola, D., Planes, S., Allemand, D., and Karsenti, E.: Expanding Tara Oceans Protocols for Underway, Ecosystemic Sampling of the Ocean-Atmosphere Interface During Tara Pacific Expedition (2016–2018), Frontiers in Marine Science, 6, 750, https://doi.org/10.3389/fmars.2019.00750, 2019.
  • Lombard, F., Bourdin, G., Pesant, S., Agostini, S., Baudena, A., Boissin, E., Cassar, N., Clampitt, M., Conan, P., Da Silva, O., Dimier, C., Douville, E., Elineau, A., Fin, J., Flores, J. M., Ghiglione, J.-F., Hume, B. C. C., Jalabert, L., John, S. G., Kelly, R. L., Koren, I., Lin, Y., Marie, D., McMinds, R., Mériguet, Z., Metzl, N., Paz-García, D. A., Pedrotti, M. L., Poulain, J., Pujo-Pay, M., Ras, J., Reverdin, G., Romac, S., Rouan, A., Röttinger, E., Vardi, A., Voolstra, C. R., Moulin, C., Iwankow, G., Banaigs, B., Bowler, C., De Vargas, C., Forcioli, D., Furla, P., Galand, P. E., Gilson, E., Reynaud, S., Sunagawa, S., Sullivan, M. B., Thomas, O. P., Troublé, R., Thurber, R. V., Wincker, P., Zoccola, D., Allemand, D., Planes, S., Boss, E., and Gorsky, G.: Open Science Resources from the Tara Pacific Expedition across Coral Reef and Surface Ocean Ecosystems, Scientific Data, 10, 324, https://doi.org/10.1038/s41597-022-01757-w, 2023.