Reproduction of PANDA: results for simulations
Creators
Description
These data are the results obtained from applying PANDA to simulations and can be used to reproduce the analysis in the paper "Dual decoding of cell types and gene expression in spatial transcriptomics with PANDA".
To ensure that the file paths match those used in the code, please place the files in the following directories within your working directory before extracting them:
"Results/simulations/paired_scenario/paired_scenario_comparison_methods.zip"
"Results/simulations/paired_scenario/PANDA_results/paired_scenario_PANDA_results_sc_results.zip"
"Results/simulations/paired_scenario/PANDA_results/st_results/paired_scenario_PANDA_results_st_results_uniform_ST.zip"
"Results/simulations/paired_scenario/PANDA_results/st_results/paired_scenario_PANDA_results_st_results_boundary_ST.zip"
"Results/simulations/paired_scenario/PANDA_results/st_results/paired_scenario_PANDA_results_st_results_uniform_Visium.zip"
"Results/simulations/paired_scenario/PANDA_results/st_results/paired_scenario_PANDA_results_st_results_boundary_Visium.zip"
"Results/simulations/unpaired_scenario/unpaired_scenario_comparison_methods.zip"
"Results/simulations/unpaired_scenario/PANDA_results/unpaired_scenario_PANDA_results_sc_results.zip"
"Results/simulations/unpaired_scenario/PANDA_results/st_results/unpaired_scenario_PANDA_results_st_results_uniform_ST.zip"
"Results/simulations/unpaired_scenario/PANDA_results/st_results/unpaired_scenario_PANDA_results_st_results_boundary_ST.zip"
"Results/simulations/unpaired_scenario/PANDA_results/st_results/unpaired_scenario_PANDA_results_st_results_uniform_Visium.zip"
"Results/simulations/unpaired_scenario/PANDA_results/st_results/unpaired_scenario_PANDA_results_st_results_boundary_Visium.zip"
"Results/simulations/merfish.zip"
"Results/simulations/reference_choice.zip"
"Results/simulations/time_memory.zip"
Files
paired_scenario_PANDA_results_st_results_uniform_ST.zip
Files
(24.5 GB)
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md5:b051616a3d09ca9eaed4323e30e68049
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md5:7fa52cf3a0095c6af6a479de9c05084a
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md5:c9f0b671c79084a6e0d04749584d7eb2
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md5:ce2c121d247dca3d4918a22580723957
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md5:3b43ca08fb0dd5c6f97d5459dfd6e7b3
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md5:81baf8800574d17e00d04ab5196fa6a3
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md5:8a96e3548f3d2600adbb6760ac48a7e1
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1.6 GB | Preview Download |