There is a newer version of the record available.

Published August 14, 2024 | Version v2
Journal article Open

Miocene pulse of diversification of the Brazil nut family

Authors/Creators

Description

This dataset include all the sample metadata associated with:

Evidence for a Miocene pulse of diversification of the Brazil nut family (Lecythidaceae) in tropical America

Jérôme Chave, Charles Pouchon, Uxue Suescun, Sébastien Lavergne, Christopher Dick, Oscar M. Vargas, Myriam Heuertz, Botany Letters. 

  • Files nuDNA.fa, mtDNA.fa, cpDNA.fa, and rDNA.fa are nuclear, mitochondrial, plastid, and ribosomal DNA alignments, respectively
  • Files in '.partitions' represent the information on the DNA alignments
  • Files in '.tre' are phylogenetic trees as output from the softwares IQtree, Astral, SDVquartet and SKmer. 
  • File nuDNA_dated1000_iqtree.tre is the main result of this analysis (dated phylogenetic tree)

Files

Files (174.0 MB)

Name Size Download all
md5:c05b3140addf854172d95cec6daca944
5.0 kB Download
md5:2222997425d8f639742da792f45450b1
4.4 MB Download
md5:4e81ababe7ce763f9e384d2b65b6f36e
2.1 kB Download
md5:615e0911e2f8eb80f12fa225ea68711b
4.7 kB Download
md5:f840ae0c00a19681db3d2164646ef56e
1.8 MB Download
md5:bd0faa6af8da2316ce105a592bfc6447
943 Bytes Download
md5:7d08a62e239d913e43e9a4d8b0276a15
3.9 kB Download
md5:331f1f82424cf4a9b11f8191a6714845
4.6 kB Download
md5:066ab5e1e6d8e92a4a731a64925b97fd
3.0 kB Download
md5:4b14969845b7016d03b1b1e6f3645013
4.7 kB Download
md5:052593d013e5ab4c317fc13b57aa6e12
162.1 MB Download
md5:e48286a466e04edb2c59fae441193718
76.0 kB Download
md5:3cfdd601055e0483f12e045510fb2fbc
5.2 MB Download
md5:09aef68da886016a05748125b41b5909
3.7 kB Download
md5:ac08d9d242b8fd2178958fbf2bb64723
289.0 kB Download
md5:59cae087e52d3ab73085248e6d6d40bf
110 Bytes Download
md5:1bbfbfe271998614146319358e802bf6
33.6 kB Download

Additional details

Additional titles

Alternative title
Miocene pulse of diversification of the Brazil nut family