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Published February 12, 2017 | Version v1
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Mitochondrial genetic diversity and structuring of northern white-breasted hedgehogs from the Central Balkans

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Djan, Mihajla, Stefanović, Milomir, Veličković, Nevena, Ćosić, Nada, Ćirović, Duško (2017): Mitochondrial genetic diversity and structuring of northern white-breasted hedgehogs from the Central Balkans. Turkish Journal of Zoology 41 (5): 774-782, DOI: 10.3906/zoo-1603-23, URL: http://dx.doi.org/10.3906/zoo-1603-23

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urn:lsid:plazi.org:pub:FFB5FFC6BE5DFFB5FFBCFFBA1C5DFFEE

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References

  • Alexandri P, Triantafyllidis A, Papakostas S, Chatzinikos E, Platis P, Papageorgiou N, Larson G, Abatzopoulos TJ, Triantaphyllidis C (2012). The Balkans and the colonization of Europe: the post-glacial range expansion of the wild boar, Sus scrofa. J Biogeogr 39: 713-723.
  • Avise JC (2004). Molecular Markers: Natural History and Evolution. 2nd ed. Sunderland, MA, USA: Sinauer Associates.
  • Bandelt HJ, Forster P, Rohl A (1999). Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16: 37-48.
  • Bannikova AA, Lebedev VS, Abramov AV, Rozhnov VV (2014). Contrasting evolutionary history of hedgehogs and gymnures (Mammalia: Erinaceomorpha) as inferred from a multigene study. Biol J Linn Soc 112: 499-519.
  • Berggren KT, Ellegren H, Hewitt GM, Seddon JM (2005). Understanding the phylogeographic patterns of European hedgehogs, Erinaceus concolor and E. europaeus using the MHC. Heredity 95: 84-90.
  • Bolfikova B, Hulva P (2012). Microevolution of sympatry: landscape genetics of hedgehogs Erinaceus europaeus and E. roumanicus in Central Europe. Heredity 108: 248-255.
  • Durka W, Babik W, Ducroz JF, Heidecke D, Rosell F, Samjaa R, Saveljev AP, Stubbe A, Ulevicius A, Stubbe M (2005). Mitochondrial phylogeography of the Eurasian beaver Castor fiber. Mol Ecol 14: 3843-3856.
  • Djan M, Maletic V, Trbojevic I, Popovic D, Velickovic N, Burazerovic J, Cirovic D (2014). Genetic diversity and structuring of the grey wolf population from the Central Balkans based on mitochondrial DNA variation. Mamm Biol 79: 277-282.
  • Excoffier L, Lischer H (2010). Arlequin suite v. 3.5: A new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10: 564-567.
  • Francois O, Durand E (2010). Spatially explicit Bayesian clustering models in population genetics. Mol Ecol Resour 10: 773-784.
  • Guillot G, Mortier F, Estoup A (2005). GENELAND: a computer package for landscape genetics. Mol Ecol Notes 5: 712-715.
  • Hall TA (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/ NT. Nucl Acid S 41: 95-98.
  • Hewitt GM (1999) Post-glacial re-colonization of European biota. Biol J Linn Soc 68: 87-112.
  • Hewitt GM (2000). The genetic legacy of the Quaternary ice ages. Nature 405: 907-913.
  • Hewitt GM (2001). Speciation, hybrid zones and phylogeography: or seeing genes in space and time. Mol Ecol 10: 537-549.
  • Hewitt GM (2004). Genetic consequences of climatic oscillations in the Quaternary. Philos T R Soc B 359: 183-195.
  • Hirata D, Mano T, Abramov AV, Baryshnikov GF, Kosintsev PA, Vorobiev AA, Raichev EG, Tsunoda H, Kaneko Y, Murata K et al. (2013). Molecular phylogeography of the brown bear (Ursus arctos) in northeastern Asia based on analyses of complete mitochondrial DNA sequences. Mol Biol Evol 30: 1644-1645.
  • Huntley B (1999). Climatic change and reconstruction. Quat Proc 7: 513-520.
  • Hutterer R (2005). Order Erinaceomorpha. In: Wilson DE, Reeder DM, editors. Mammal Species of the World: A Taxonomic and Geographic Reference. Baltimore, MD, USA: Johns Hopkins University Press, pp. 212-219.
  • Kocher TD, Thomas WK, Meyer A (1989). Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. P Natl Acad Sci USA 86: 6196-6200.
  • Krystufek B (2002). Cranial variability in the Eastern hedgehog Erinaceus concolor (Mammalia: Insectivora). J Zool 258: 365- 373.
  • Krystufek B, Reed JM (2004). Pattern and process in Balkan biodiversity: an overview. In: Griffiths H, Krystufek B, Reed JM, editors. Balkan Biodiversity: Pattern and Process in the European Hotspot. Dordrecht, the Netherlands: Springer, pp. 1-8.
  • Krystufek B, Tvrtkovic N, Paunovic M, Ozkan B (2009). Size variation in the northern white-breasted hedgehog Erinaceus roumanicus: latitudinal cline and the island rule. Mammalia 73: 299-306.
  • Librado P, Rozas J (2009). DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25: 1451- 1452.
  • Miller MA, Pfeiffer W, Schwartz T (2010). Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In: Proceedings of the Gateway Computing Environments Workshop (GCE); 14 November 2010; New Orleans, LA, USA. Piscataway, NJ, USA: IEEE, pp. 1-8.
  • PalsbOll PJ, Berube M, Allendorf FW (2007). Identification of management units using population genetic data. Trends Ecol Evol 22:11-16.
  • Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Hohna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP (2012). MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61: 539-542.
  • Santucci F, Emerson BC, Hewitt GM (1998). Mitochondrial DNA phylogeography of European hedgehogs. Mol Ecol 7: 1163- 1172.
  • Savic IR (2008). Diversification of the Balkan fauna: its origin, historical development and present status. In: Makarov SE, Dimitrijevic RN, editors. Advances in Arachnology and Developmental Biology: Papers Dedicated to Professor Bozidar P. M. Curcic. Belgrade, Serbia: SASA & UNESCO MAB Serbia, pp. 57-78.
  • Schaschl H, Lymberakis P, Suchentrunk F (2002). On allozyme and cyt-b gene characteristics of Cretan hedgehogs, Erinaceus concolor nesiotes Bate, 1906. Mamm Biol 67: 257-267.
  • Schmitt T (2007). Molecular biogeography of Europe: Pleistocene cycles and postglacial trends. Front Zool 4: 11.
  • Schmitt T, Varga Z (2012). Extra-Mediterranean refugia: the rule and not the exception? Front Zool 9: 22.
  • Schwartz MK, Luikart G, Waples RS (2007.) Genetic monitoring as a promising tool for conservation and management. Trends Ecol Evol 22: 25-33.
  • Seddon JM, Santucci F, Reeve NJ, Hewitt GM (2001). DNA footprints of European hedgehogs, Erinaceus europaeus and E. concolor: Pleistocene refugia, postglacial expansion and colonization routes. Mol Ecol 10: 2187-2198.
  • Seddon JM, Santucci F, Reeve N, Hewitt GM (2002). Caucasus Mountains divide postulated postglacial colonization routes in the white-breasted hedgehog, Erinaceus concolor. J Evolution Biol 15: 463-467.
  • Sommer RS (2007). When east met west: the sub-fossil footprints of the west European hedgehog and the northern white-breasted hedgehog during the Late Quaternary in Europe. J Zool 273: 82-89.
  • Stefanovic M, Velickovic N, Cosic N, Cirovic D, Dan M (2016). Genetic variability of Northern white-breasted hedgehog (Erinaceus roumanicus) from Serbia.Balkan Journal of Wildlife Research 3: 1-6.
  • Suchentrunk F, Haiden A, Hartl GB (1998). On biochemical genetic variability and divergence of the two hedgehog species Erinaceus europaeus and E. concolor in central Europe. Z Saugetierkunde 63: 257-265.
  • Taberlet P, Fumagalli L, Wust-Saucy AG, Cossons JF (1998). Comparative phylogeography and postglacial colonization routes in Europe. Mol Ecol 7: 453-464.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013). MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Mol Biol Evol 30: 2725-2729.
  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997). The Clustal W windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
  • Velickovic N, Djan M, Ferreira E, Stergar M, Obreht D, Maletic V, Fonseca C (2015). From north to south and back: the role of the Balkans and other southern peninsulas in the recolonization of Europe by wild boar. J Biogeogr 42: 716-728.
  • Zachos FE, Hartl GB (2011). Phylogeography, population genetics and conservation of the European red deer Cervus elaphus. Mammal Rev 41: 138-150.