Published July 30, 2024
| Version v2
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GROVER DNA language model tutorial
Description
Tutorial for the use of GROVER as a foundation model for different tasks to interrogate the human genome. More information on the study can be found at https://www.biorxiv.org/content/10.1101/2023.07.19.549677v1. Links in the tutorial point to Google Collab, but are also uploaded at Zenodo.
Pretrained GROVER can be found at https://doi.org/10.5281/zenodo.8373117.
The tokenised genome (hg19) can be found at https://doi.org/10.5281/zenodo.8373053.
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240730_GROVER_Tutorial.ipynb
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Additional details
Related works
- Is cited by
- Preprint: https://www.biorxiv.org/content/10.1101/2023.07.19.549677v1 (URL)
- Is version of
- Computational notebook: 10.5281/zenodo.8373158 (DOI)
- Requires
- Software: 10.5281/zenodo.8373117 (DOI)
- Dataset: 10.5281/zenodo.8373053 (DOI)