Foldseek Multimer
Authors/Creators
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1.
Seoul National University
- 2. ELKMO
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3.
Weizmann Institute of Science
-
4.
Max Planck Institute for Multidisciplinary Sciences
Description
Rapid and Sensitive Protein Complex Alignment with Foldseek-Multimer
Advances in computational structure prediction will vastly augment the hundreds of thousands of currently-available protein complex structures. Translating these into discoveries requires aligning them, which is computationally prohibitive. Foldseek-Multimer computes complex alignments from compatible chain-to-chain alignments, identified by efficiently clustering their superposition vectors. Foldseek-Multimer is 3-4 orders of magnitudes faster than the gold standard, while producing comparable alignments; allowing it to compare dozens of billions of complex-pairs in a day. Foldseek-Multimer is open-source software: github.com/steineggerlab/foldseek and webserver: search.foldseek.com.
Notice
This Zenodo release accompanies the GitHub repository, which contains both the analysis scripts as well as clarifications about the data in this release.
Files
Files
(25.2 GB)
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607.1 kB | Download |
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181.2 MB | Download |