Published June 20, 2018 | Version v1
Dataset Open

GROMOS 43A1-S3 POPE Simulations (versions 1 and 2) 313 K (NOTE: anisotropic pressure coupling)

Authors/Creators

Description

Two GROMOS 43A1-S3 POPE bilayer simulations performed using GROMACS 4.0.7 for 200 ns with different starting velocities. Simulations were performed with the standard 43A1-S3 settings: a 1.0 nm cut-off with PME for the Coulombic interactions and a twin-range 1.0/1.6 nm cut-off for the van der Waals interactions. These simulations were performed at 313 K with a 128 lipid bilayer and used anisotropic pressure coupling. The full trajectories are provided bar the initial 100 ns. The starting structure was made through the conversion of an equilibrated GROMOS 43A1-S3 POPC membrane.

Files

Files (2.7 GB)

Name Size Download all
md5:39ca7b2ed2768b437721ff8eddb10bc4
637.4 kB Download
md5:fedb2040d5f805e8fc105820e5e20d9c
637.4 kB Download
md5:b11bdbd91bcb05d860372c46b9e3f665
1.2 MB Download
md5:d6b537228b7ac3cbd1e554aec62159b9
54.4 MB Download
md5:ebc0d865242188cbb9717f159f1d04db
1.3 GB Download
md5:f762e9b891f5c3ad464e00be5af659ac
1.2 MB Download
md5:5f18b00094949c24cb00873abc360af7
54.4 MB Download
md5:f8b57de57d711730dffb02a4a8fea442
1.3 GB Download