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Published July 10, 2020 | Version v1
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Lacydoniidae (Annelida) Off the Coast of North-eastern Japan: A Description of Lacydonia japonica sp. nov.

Authors/Creators

  • 1. Misaki Marine Biological Station, Graduate School of Science, The University of Tokyo, Miura 238-0225, Japan.
  • 2. Bioscience Group, National Institute of Polar Research, Tachikawa 190-8518, Japan. E-mail: beniimo7010@gmail.com (Jimi)
  • 3. Marine Biodiversity and Environmental Assessment Research Center, Japan Agency for Marine-Earth Science and Technology,
  • 4. Graduate School/Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan. E-mail: kajihara@eis.hokudai.ac.jp (Kajihara)

Description

Hookabe, Natsumi, Jimi, Naoto, Tsuchida, Shinji, Fujiwara, Yoshihiro, Kajihara, Hiroshi (2020): Lacydoniidae (Annelida) Off the Coast of North-eastern Japan: A Description of Lacydonia japonica sp. nov. Zoological Studies 59 (28): 1-9, DOI: 10.6620/ZS.2020.59-28, URL: http://dx.doi.org/10.5281/zenodo.12821855

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Identifiers

LSID
urn:lsid:plazi.org:pub:C03A4E3BFFF2FF831662FFA8FFB3FFBE
URL
http://publication.plazi.org/id/C03A4E3BFFF2FF831662FFA8FFB3FFBE

Cites
Publication: 10.1016/j.dsr2.2014.09.006 (DOI)
Publication: 10.1007/s00227-009-1296-9 (DOI)
Publication: 10.1093/oxfordjournals.molbev.a026334 (DOI)
Publication: 10.1093/molbev/mst010 (DOI)
Publication: 10.1093/molbev/msw054 (DOI)
Publication: 10.1093/molbev/ (DOI)
Publication: 10.1006/mpev.1994.1024 (DOI)
Publication: 10.1111/j.1095- (DOI)
Publication: 10.1515/popore-2017-0011 (DOI)
Publication: 10.1111/zsc.12044 (DOI)
Publication: 10.1016/j.ympev.2010.10.010 (DOI)
Publication: 10.1093/sysbio/syy032 (DOI)
Publication: 10.1017/S0025315415001381 (DOI)
Publication: 10.1093/sysbio/sys029 (DOI)
Publication: 10.1071/IS05023 (DOI)
Publication: 10.1093/bioinformatics/btu033 (DOI)
Publication: 10.1007/s12526- (DOI)
Publication: 10.1093/sysbio/46.1.1 (DOI)
Has part
Taxonomic treatment: http://treatment.plazi.org/id/3C033643FFF1FF8615BCFBD5FEF9FC4B (URL)
Figure: 10.5281/zenodo.12822203 (DOI)
Figure: 10.5281/zenodo.12822207 (DOI)
Figure: 10.5281/zenodo.12822209 (DOI)
Figure: 10.5281/zenodo.12822213 (DOI)
Figure: 10.5281/zenodo.12822215 (DOI)

References

  • Alalykina IL. 2015. Polychaete composition from the abyssal plain adjacent to the Kuril-Kamchatka Trench with the description of a new species of Sphaerephesia (Polychaeta: Sphaerodoridae). Deep-Sea Res II 111:166-174. doi:10.1016/j.dsr2.2014.09.006.
  • Barroso R, Klautau M, Sole-Cava AM, Paiva PC. 2010. Eurythoe complanata (Polychaeta: Amphinomidae), the 'cosmopolitan' fireworm, consists of at least three cryptic species. Mar Biol 157:69-80. doi:10.1007/s00227-009-1296-9.
  • Bergstrom E. 1914. Zur Systematik der Polychaetenfamilie der Phyllodociden. Zool Bidrag Uppsala 3:37-224.
  • Boggemann M. 2009. Polychaetes (Annelida) of the abyssal SE Atlantic. Org Divers Evol 9:251-428. doi:10.1016/ j.ode.2009.10.001.
  • Blake JA. 1994. Family Lacydoniidae Bergstrom, 1914. In: Blake JA, Hilbig B (eds) Taxonomic atlas of the benthic fauna of the Santa Maria Basin and Western Santa Barbara Channel. Volume 4, Oligochaeta and Polychaeta: Phyllodocida (Phyllodocidae to Paralacydoniidae), 1st edn. Santa Barbara Museum of Natural History, Santa Barbara, CA, USA.
  • Carey A. 1977. Environmental Assessment of the Alaskan Continental Shelf. Annual Reports of Principal Investigators for the year ending March 1977 Vol 6. Receptors - Fish, Littoral Benthos. Department of Commerce, National Oceanic and Atmospheric Administration, Environmental Research Laboratory, Boulder.
  • Castresana J. 2000. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol 17:540-552. doi:10.1093/oxfordjournals.molbev.a026334.
  • Ehlers E. 1913. Die Polychaeten-Sammlung der Deutschen Sudpolar- Expedition 1901-1903. Deut Sudpolarexped 13:397-598.
  • Eklof J, Pleijel F, Sundberg P. 2007. Phylogeny of benthic Phyllodocidae (Polychaeta) based on morphological and molecular data. Mol Phylogenet Evol 45:261-271. doi:10.1016/ j.ympev.2007.04.015.
  • Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R. 1994. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol 3:294-299.
  • Giribet G, Carranza S, Baguna J, Riutort M, Ribera C. 1996. First molecular evidence for the existence of a Tardigrada + Arthropoda clade. Mol Biol Evol 13:76-84.
  • Hartman O. 1967. Polychaetous annelids collected by the USNS Eltanin and Staten Island Cruises, chiefly from Antarctic Seas. Allan Hancock Monogr Mar Biol 2:1-387.
  • Hartman O, Fauchald K. 1971. Deep-water benthic polychaetous annelids off New England to Bermuda and other North Atlantic areas. Part II. Allan Hancock Monogr Mar Biol 6:1-327.
  • Hartmann-Schroder G. 1993. Die Polychaeten der 'Polarstern'- Reise ANT X/lb zur Antarktischen Halbinsel und Isla de los Estados (Feuerland, Argentinien) 1991. Teil 1: Polynoidae bis Iphitimidae. Mitt Hamb Zool Mus Inst 90:127-150.
  • Hartmann-Schroder G. 1996. Annelida, Borstenwurmer, Polychaeta. Die Tierwelt Deutschlands und der angrenzenden Meeresteile nach ihren Merkmalen und nach ihrer Lebensweise, Gustav Fischer Verlag, Jena 2. Auflage, 58:1-648.
  • Hillis DM, Dixon MT. 1991. Ribosomal DNA: molecular evolution and phylogenetic inference. Q Rev Biol 66:411-453.
  • Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30:772-780. doi:10.1093/molbev/mst010.
  • Kimura M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111-120.
  • Kinberg, JGH. 1866. Annulata Nova, Continuatio. Ofversigt Kongl Vetens forhand 22:239-258.
  • Kumar S, Stecher G, Tamura K. 2016. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol 33:1870-187. doi:10.1093/molbev/msw054.
  • Lanfear R, Frandsen PB, Wright AM, Senfeld T, Calcott B. 2016. PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Mol Biol Evol 34:772-773. doi:10.1093/molbev/ msw260.
  • Laubier L. 1975. Lacydonia laureci sp. n., annelide polychete nouvelle de l'etage abyssal de Mediterranee Orientale. Vie Milieu 25:75-82.
  • Linnaeus C. 1767. Systema naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis. ed. 12. 1. Regnum Animale. 1 & 2. Laurentius Salvius, Holmia.
  • Littlewood DTJ. 1994. Molecular phylogenetics of cupped oysters based on partial 28S rRNA gene sequences. Mol Phylogenet Evol 3:221-229. doi:10.1006/mpev.1994.1024.
  • Magalhaes WF, Bailey-Brock JH, Rizzo AE. 2012. Lacydonia quadrioculata, a new lacydoniid (Polychaeta: Phyllodocida) from Oahu, Hawaii. Zootaxa 3589:65-76. doi:10.11646/ zootaxa.3589.1.
  • Malmgren AJ. 1865. Nordiska Hafs-Annulater. Ofversigt Kongl Vetens forhand 22:51-110.
  • Maltagliati F, Casu M, Castelli A. 2004. Morphological and genetic evidence supports the existence of two species in the genus Ophelia (Annelida, Polychaeta) from the western Mediterranean. Biol J Linn Soc 83:101-113. doi:10.1111/j.1095- 8312.2004.00374.x.
  • Manchenko GP, Radashevsky VI. 2002. Genetic differences between two sibling sympatric Dipolydora species (Polychaeta: Spionidae) from the Sea of Japan, and a new species description. J Mar Biol Assoc UK 82:193-199. doi:10.1017/ S0025315402005350.
  • Marion AF, Bobretzky N. 1875. Etude des Annelides du golfe de Marseille. Ann Sci Nat Ser 6 2:1-106.
  • Mazurkiewicz M, Gromisz S, Legezynska J, Wlodarska-Kowalczuk M. 2017. First records of Lacydonia eliasoni Hartmann-Schroder, 1996 (Polychaeta: Phyllodocida) in the European Arctic. Pol Polar Res 38:175-185. doi:10.1515/popore-2017-0011.
  • Nygren A. 2014. Cryptic polychaete diversity: a review. Zool Scr 43:172-183. doi:10.1111/zsc.12044.
  • Nygren A, Pleijel F. 2011. From one to ten in a single stroke - resolving the European Eumida sanguinea (Phyllodocidae, Annelida) species complex. Mol Phylogenet Evol 58:132-141. doi:10.1016/j.ympev.2010.10.010.
  • Palumbi SR, Martin A, Romano S, McMillan WO, Stice L, Grabowski G. 1991. The simple fool's guide to PCR, v. 2.0. Department Zoology, Kewalo Marine Laboratory, University of Hawaii, Honolulu, 45 pp.
  • Paul AZ, Menzies RJ. 1974. Benthic ecology of the high arctic deep sea. Mar Biol 27:251-262.
  • Rambaut A, Drummond AJ, Xie D, Baele G, Suchard MA. 2018. Posterior summarisation in Bayesian phylogenetics using Tracer ver. 1.7. Syst Biol 67:901-904. doi:10.1093/sysbio/syy032.
  • Rizzo AE, Magalhaes WF, Santos CS. 2016. Lacydoniidae Bergstrom, 1914 (Polychaeta) in the South Atlantic: morphology, three new species and five new records. J Mar Biol Assoc UK 96:1265- 1285. doi:10.1017/S0025315415001381.
  • Ronquist F, Teslenko M, Van der Mark P, Ayres DL, Darling A, Hohna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61:539-542. doi:10.1093/sysbio/sys029.
  • Rouse GW, Pleijel F. 2001. Polychaetes. Oxford University Press, London, UK.
  • Schwendinger PJ, Giribet G. 2005. The systematics of the south-east Asian genus Fangensis Rambla (Opiliones: Cyphophthalmi: Stylocellidae). Invert Syst 19:297-323. doi:10.1071/IS05023.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30:1312-1313. doi:10.1093/bioinformatics/btu033.
  • Tosuji H, Bastrop R, Gotting M, Park T, Hong JS, Sato M. 2019. Worldwide molecular phylogeny of common estuarine polychaetes of the genus Hediste (Annelida: Nereididae), with special reference to interspecific common haplotypes found in southern Japan. Mar Biodiv 49:1385-1402. doi:10.1007/s12526- 018-0917-2.
  • Uschakov PV. 1958. Dra novykh vida mnogoshchetinkovykh chervei iz semeistva Phyllodocidae (Polychaeta) s abissal'nykh glubin Kurilo -Kamchatskor padiny [Two new species of polychaetes belonging to the family Phyllodocidae from the abysses of the Kurile-Kamchatka depression]. Trud Instit Okeanolog, Akademia Nauk SSSR 27:204-207.
  • Uschakov PV. 1972. Fauna of the USSR. Polychaetes. Vol. I. Polychaetes of the suborder Phyllodociformia of the Polar Basin and the northwestern part of the Pacific (Families Phyllodocidae, Alciopidae, Tomopteridae, Typhloscolecidae, and Lacydoniidae). Akademia Nauk SSSR, Zool Instit 102:1-271.
  • Whiting MF, Carpenter JM, Wheeler QD, Wheeler WC. 1997. The Strepsiptera problem: phylogeny of the holometabolous insect orders inferred from 18S and 28S ribosomal DNA sequences and morphology. Syst Biol 46:1-68. doi:10.1093/sysbio/46.1.1.