Published July 17, 2024
| Version v0.5.0
Software
Open
NeuroConv
Description
v0.5.0 (July 17, 2024)
Deprecations
- The usage of
compression_optionsdirectly through theneuroconv.tools.audiosubmodule is now deprecated - users should refer to the newconfigure_backendmethod for a general approach for setting compression. PR #939 - The usage of
compressionandcompression_optsdirectly through theFicTracDataInterfaceis now deprecated - users should refer to the newconfigure_backendmethod for a general approach for setting compression. PR #941 - The usage of
compressiondirectly through theneuroconv.tools.neosubmodule is now deprecated - users should refer to the newconfigure_backendmethod for a general approach for setting compression. PR #943 - The usage of
compression_optionsdirectly through theneuroconv.tools.ophyssubmodule is now deprecated - users should refer to the newconfigure_backendmethod for a general approach for setting compression. PR #940 - Removed the option of running
interface.run_conversionwithoutnwbfile_pathargument . PR #951
Features
- Added docker image and tests for an automated Rclone configuration (with file stream passed via an environment variable). PR #902
Bug fixes
- Fixed the conversion option schema of a
SpikeGLXConverterwhen used inside anotherNWBConverter. PR #922 - Fixed a case of the
NeuroScopeSortingExtractorwhen the optionalxml_file_pathis not specified. PR #926 - Fixed
Can't specify experiment type when converting .abf to .nwb with Neuroconv. PR #609 - Remove assumption that the ports of the Intan acquisition system correspond to electrode groupings in
IntanRecordingInterfacePR #933 - Add ValueError for empty metadata in
make_or_load_nwbfilewhen an nwbfile needs to be created PR #948
Improvements
- Make annotations from the raw format available on
IntanRecordingInterface. PR #934 - Add an option to suppress display the progress bar (tqdm) in
VideoContextPR #937 - Automatic compression of data in the
LightnignPoseDataInterfacehas been disabled - users should refer to the newconfigure_backendmethod for a general approach for setting compression. PR #942 - Port over
dlc2nwbutility functions for ease of maintenance. PR #946
Notes
Files
catalystneuro/neuroconv-v0.5.0.zip
Files
(1.5 MB)
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md5:af0adbbc69b9694c1c566f0591ab7484
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Additional details
Related works
- Is supplement to
- Software: https://github.com/catalystneuro/neuroconv/tree/v0.5.0 (URL)