Published December 31, 2023 | Version v1
Journal article Open

Landscape biogeography and population structuring of a facultatively amphidromous galaxiid fish, Galaxias brevipinnis

Description

Augspurger, Jason M., Jarvis, Matt G., Wallis, Graham P., King, Tania M., Ingram, Travis, Hicks, Andy S., Closs, Gerard P. (2023): Landscape biogeography and population structuring of a facultatively amphidromous galaxiid fish, Galaxias brevipinnis. Cybium 47 (4): 417-430, DOI: 10.26028/cybium/2023-033, URL: http://dx.doi.org/10.26028/cybium/2023-033

Files

source.pdf

Files (3.0 MB)

Name Size Download all
md5:79e4a57ce7bea6cafa6678ffbe143205
3.0 MB Preview Download

Linked records

Additional details

Identifiers

LSID
urn:lsid:plazi.org:pub:FFE4A57CFFBEFFCAFA66FFFFBE143205
URL
http://publication.plazi.org/id/FFE4A57CFFBEFFCAFA66FFFFBE143205

References

  • ALLIBONE R.M. & WALLIS G.P., 1993. - Genetic variation and diadromy in some native New Zealand galaxiids (Teleostei: Galaxiidae). Biol. J. Linn. Soc., 50: 19-33. https://doi. org/10.1111/j.1095-8312.1993.tb00916.x
  • ALLIBONE R.M., CROWL T.A., HOLMES J.M., KING T.M., MCDOWALL R.M., TOWNSEND C.R. & WALLIS G.P., 1996. - Isozyme analysis of Galaxias species (Teleostei: Galaxiidae) from the Taieri River, South Island, New Zealand: a species complex revealed. Biol. J. Linn. Soc., 57: 107-127. https://doi.org/10.1006/bijl.1996.0009
  • ALTSCHUL S.F., GISH W., MILLER W., MYERS E.W. & LIP- MAN D.J., 1990. - Basic local alignment search tool. J. Mol. Biol., 215: 403-410.
  • AUGSPURGER J.M. & CLOSS G.P., 2019. - Early life-history adaptation influences conservation approaches for facultatively amphidromous fish. Aquat. Conserv., 29: 1403-1408. https:// doi.org/10.1002/aqc.3077
  • AUGSPURGER J.M., WARBURTON M.L. & CLOSS G.P., 2017. - Life-history plasticity in amphidromous and catadromous fishes: a continuum of strategies. Rev. Fish Biol. Fish., 27: 177- 192. https://doi.org/10.1007/s11160-016-9463-9
  • BOOTH W., MONTGOMERY W.I. & PRODOHL P.A., 2009. - Spatial genetic structuring in a vagile species, the European wood mouse. J . Z o o l. , 279: 219-228. h t t p s :/ / d o i. org/10.1111/j.1469-7998.2009.00608.x
  • BURRIDGE C.P., MCDOWALL R.M., CRAW D., WILSON M.V.H. & WATERS J.M., 2012. - Marine dispersal as a prerequisite for Gondwanan vicariance among elements of the galaxiid fish fauna. J. Biogeogr., 39: 306-321. https://doi. org/10.1111/j.1365-2699.2011.02600.x
  • CAMPANA S.E., 1999. - Chemistry and composition of fish otoliths: pathways, mechanisms and applications. Mar. Ecol. Prog. Ser., 188: 263-297.
  • CARLSON A.K, FINCEL M.J. & GRAEB B.D.S., 2017. - Otolith chemistry indicates walleye movement and entrainment in a large serial reservoir system. Fish. Manage. Ecol., 24: 217-229. https://doi.org/10.1111/fme.12224
  • CARROLL S.P., HENDRY A.P., REZNICK D.N. & FOX C.W., 2007. - Evolution on ecological time-scales. Funct. Ecol., 21: 387-393. https://doi.org/10.1111/j.1365-2435.2007.01289.x
  • CASQUET J., THEBAUD C. & GILLESPIE R.G., 2012. - Chelex without boiling, a rapid and easy technique to obtain stable amplifiable DNA from small amounts of ethanol-stored spiders. Mol. Ecol. Resour., 12: 136-141. https://doi.org/10.1111/ j.1755-0998.2011.03073.x
  • CHAPMAN A., MORGAN D.L., BEATTY S.J. & GILL H.S., 2006. - Variation in life history of land-locked lacustrine and riverine populations of Galaxias maculatus (Jenyns, 1842) in Western Australia. Environ. Biol. Fish., 77: 21-37. https://doi. org/10.1007/s10641-006-9051-2
  • CHEN L., LIU Y., HU Z., GAO S., ZONG K. & CHEN H., 2011. - Accurate determinations of fifty-four major and trace elements in carbonate by LA-ICP-MS using normalization strategy of bulk components as 100%. Chem. Geol., 284: 283-295. https:// doi.org/10.1016/j.chemgeo.2011.03.007
  • CONCEPCION G.B. & NELSON S.G., 1999. - Effects of a dam and reservoir on the distributions and densities of macrofauna in tropical streams of Guam (Mariana Islands). J. Freshw. Ecol., 14: 447-454. https://doi.org/10.1080/02705060.1999.9663703
  • COOK B.D., BAKER A.M., PAGE T.J., GRANT S.C., FAWCETT J.H., HURWOOD D A. & HUGHES J.M., 2006. - Biogeographic history of an Australian freshwater shrimp, Paratya australiensis (Atyidae): the role life history transition in phylogeographic diversification. Mol. Ecol., 15: 1083-1093. https:// doi.org/10.1111/j.1365-294X.2006.02852.x
  • COOK B.D., BERNAYS S., PRINGLE C.M. & HUGHES J.M., 2009. - Marine dispersal determines the genetic population structure of migratory stream fauna of Puerto Rico: evidence for island-scale population recovery processes. J. North. Am. Benthol. Soc., 28: 709-718. https://doi.org/10.1899/09-008.1
  • COWEN R.K., LWIZA K.M.M., SPONAUGLE S., PARIS C.B. & OLSON D.B., 2000. - Connectivity of marine populations: open or closed? Science, 287: 857-859. https://doi.org/10.1126/ science.287.5454.857
  • CRAW D., UPTON P., BURRIDGE C.P., WALLIS G.P. & WATERS J.M., 2016. - Rapid biological speciation driven by tectonic evolution in New Zealand. Nat. Geosci., 9: 140-144. https://doi.org/10.1038/ngeo2618
  • DAVID B.O., 2003. - Conservation, management and research directions for giant kokopu (Galaxias argenteus) in Otago. (DOC Science Internal Series 112). Wellington, New Zealand: New Zealand Department of Conservation.
  • DAVID B.O., JARVIS M., OZKUNDAKCI D., COLLIER K.J., HICKS A.S. & REID M., 2019. - To sea or not to sea? Multiple lines of evidence reveal the contribution of non-diadromous recruitment for supporting endemic fish populations within New Zealand's longest river. Aquat. Conserv., 29: 1409-1423. https://doi.org/10.1002/aqc.3022
  • DENNENMOSER S., ROGERS S.M. & VAMOSI S.M., 2014. - Genetic population structure in prickly sculpin (Cottus asper) reflects isolation-by-environment between two life-history eco- types. Biol. J. Linn. Soc., 113: 943-957. https://doi.org/10.1111/ bij.12384
  • DINGLE H. & DRAKE V.A., 2007. - What is migration? Bio- Science, 57: 113-121. https://doi.org/10.1641/B570206
  • ELSDON T.S. & GILLANDERS B.M., 2005. - Consistency of patterns between laboratory experiments and field collected fish in otolith chemistry: an example and applications for salinity reconstructions. Mar. Freshw. Res., 56: 609-617. https://doi. org/10.1071/MF04146
  • FUSSMANN G.F., LOREAU M. & ABRAMS P.A., 2007. - Ecoevolutionary dynamics of communities and ecosystems. Funct. Ecol., 21: 465-477. https://doi.org/10.1111/j.1365-2435. 2007.01275.x
  • GILLANDERS B.M., 2005. - Otolith chemistry to determine movements of diadromous and freshwater fish. Aquat. Living Resour., 18: 291-300. https://doi.org/10.1051/alr:2005033
  • GOTO A. & ARAI T., 2003. - Migratory histories of three types of Cottus pollux (small-egg, middle-egg, and large-egg types) as revealed by otolith microchemistry. Ichthyol. Res., 50: 67-72. https://doi.org/10.1007/s102280300009
  • GOTO A., YOKOYAMA R. & SIDELEVA V.G., 2015. - Evolutionary diversification in freshwater sculpins (Cottoidea): a review of two major adaptive radiations. Environ. Biol. Fish., 98: 307-335.
  • GOUSKOV A. & VORBURGER C., 2016. - River fragmentation and fish population structure: a comparison of three Swiss mid- land rivers. Freshw. Sci., 35: 689-700. https://doi.org/10.1086/ 685658
  • GRAMMER G.L., MORRONGIELLO J.R., IZZO C., HAW- THORNE P.J., MIDDLETON J.F. & GILLANDERS B.M., 2017. - Coupling biogeochemical tracers with fish growth reveals physiological and environmental controls on otolith chemistry. Ecol. Monogr., 87: 487-507. https://doi.org/10.1002/ ecm.1264
  • HICKFORD M.J.H. & SCHIEL D.R., 2016. - Otolith microchemistry of the amphidromous Galaxias maculatus shows recruitment to coastal rivers from unstructured larval pools. Mar. Ecol. Prog. Ser., 548: 197-207.
  • HICKS A.S., 2012. - Facultative amphidromy in galaxiids and bullies: the science, ecology, and management implications. PhD thesis. University of Otago.
  • HICKS A.S., JARVIS M.G., DAVID B.O., WATERS J.M., NOR- MAN M.D. & CLOSS G.P., 2017. - Lake and species specific patterns of non-diadromous recruitment in amphidromous fish: the importance of local recruitment and habitat requirements. Mar. Freshw. Res., 68: 2315-2323. https://doi.org/10.1071/ MF16387
  • HOGAN J.D., BLUM M.J., GILLIAM J.F., BICKFORD N. & MCINTYRE, P.B., 2014. - Consequences of alternative dispersal strategies in a putatively amphidromous fish. Ecology, 95: 2397-2408. https://doi.org/10.1890/13-0576.1
  • HUGHES J.M., GOUDKAMP K., HURWOOD D., HANCOCK M. & BUNN S., 2003. - Translocation causes extinction of a local population of the freshwater shrimp Paratya australiensis. Conserv. Biol., 17: 1007-1012.
  • HUGHES J.M., SCHMIDT D.J., MACDONALD J.I., HUEY J.A. & CROOK D.A., 2014. - Low interbasin connectivity in a facultatively diadromous fish: Evidence from genetics and otolith chemistry. Mol. Ecol., 23: 1000-1013. https://doi.org/10.1111/ mec.12661
  • JAECKS T., BOND M.H. & QUINN T.P., 2016. - Can dietary reliance on Pacific salmon eggs create otolith Sr/Ca signatures that mimic anadromy in resident salmonids? Environ. Biol. Fish., 99: 237-247. https://doi.org/10.1007/s10641-016-0470-4
  • JARVIS M.G. & CLOSS G.P., 2015. - Larval drift of amphidromous Gobiomorphus spp. in a New Zealand coastal stream: a critical spatial and temporal window for protection. N. Z. J. Mar. Freshw. Res., 49: 439-447. https://doi.org/10.1080/00288 330.2015.1072569
  • JARVIS M.G. & CLOSS G.P., 2019. - Water infrastructure and the migrations of amphidromous species: impacts and research requirements. J. Ecohydraul., 4: 4-13. https://doi.org/10.1080/2 4705357.2019.1611390
  • JOCHUM K.P., WEIS U., STOLL B., KUZMIN D., YANG Q., RACZEK I., JACOB D.E., STRACKE A., BIRBAUM K., FRICK D.A., GUNTHER D. & ENZWEILER J., 2011. - Determination of reference values for NIST SRM 610-617 glasses following ISO guidelines. Geostand. Geoanal. Res., 35: 397-429. https://doi.org/10.1111/j.1751-908X.2011.00120.x
  • JONES G.P., ALMANY G.R., RUSS G.R., SALE P.F., STENECK R.S., VAN OPPEN M.J.H. & WILLIS B.L., 2009. - Larval retention and connectivity among populations of corals and reef fishes: History, advances and challenges. Coral Reefs, 28: 307- 325. https://doi.org/10.1007/s00338-009-0469-9
  • KEITH P. & LORD C., 2011. - Tropical freshwater gobies: amphidromy as a life cycle. In: Patzner R.A., Van Tassell J.L., Kovacic M. & Kapoor B.G. (Eds), The Biology of Gobies. Boca Raton, FL, CRC Press: 243-277. https://doi.org/10.1201/b11397
  • KEKKONEN J., SEPPA P., JENSEN H., VAISANEN R.A. & BROMMER J.E., 2011. - Low genetic differentiation in a sed- entary bird: house sparrow population genetics in a contiguous landscape. Heredity, 106: 183-190. https://doi.org/10.1038/ hdy.2010.32
  • KING K.J., YOUNG K.D., WATERS J.M. & WALLIS G.P., 2003. - Preliminary genetic analysis of koaro (Galaxias brevipinnis) in New Zealand lakes: evidence for allopatric differentiation among lakes but little population subdivision within lakes. J. R. Soc. N. Z., 33: 591-600. https://doi.org/10.1080/03014223.200 3.9517747
  • KOPELMAN N.M., MAYZEL J., JAKOBSSON M., ROSEN- BERG N.A. & MAYROSE I., 2015. - Clumpak: a program for identifying clustering modes and packaging population structure inferences across K. Mol. Ecol. Resour., 15: 1179-1191. https://doi.org/10.1111/1755-0998.12387
  • LEVIN S.A., 1992. - The problem of pattern and scale in ecology: the Robert H. MacArthur award lecture. Ecology, 73: 1943- 1967. https://doi.org/10.2307/1941447
  • MCDOWALL R.M., 1990. - New Zealand Freshwater Fishes: a Natural History and Guide. Auckland, New Zealand: Heine- mann-Reed: 553 p.
  • MCDOWALL R.M., 2003. - Hawaiian biogeography and the islands' freshwater fish fauna. J. Biogeogr., 30: 703-710. https:// doi.org/10.1046/j.1365-2699.2003.00851.x
  • MCDOWALL R.M., 2007. - On amphidromy, a distinct form of diadromy in aquatic organisms. Fish Fish., 8: 1-13. https://doi. org/10.1111/j.1467-2979.2007.00232.x
  • Moody K.N., Hunter S.N., Childress M.J., Blob R.W., Schoenfuss H.L., Blum M.J. & Ptacek M.B., 2015. - Local adaptation despite high gene flow in the waterfall-climbing Hawaiian goby, Sicyopterus stimpsoni. Mol. Ecol., 24: 545-563.
  • NORDLIE F.G., 2012. - Life-history characteristics of eleotrid fishes of the western hemisphere, and perils of life in a vanish- ing environment. Rev. Fish Biol. Fish., 22: 189-224. https://doi. org/10.1007/s11160-011-9229-3
  • PATON C., HELLSTROM J., PAUL B., WOODHEAD J. & HERGT J., 2011. - Iolite: freeware for the visualisation and processing of mass spectrometric data. J. Anal. Atom. Spectrom., 26: 2508-2518. https://doi.org/10.1039/C1JA10172B
  • PEAKALL R. & SMOUSE P.E., 2006. - Genalex 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol. Ecol. Notes, 6: 288-295. https://doi.org/10.1111/ j.1471-8286.2005.01155.x
  • PINSKY M.L., SAENZ-AGUDELO P., SALLES O.C., ALMANY G.R., BODE M., BERUMEN M.L., ANDREOUET S., THOR- ROLD S., JONES G.P. & PLANES S., 2017. - Marine dispersal scales are congruent over evolutionary and ecological time. C u r r. B i o l., 27: 149-154. https://doi.org/10.1016/j. cub.2016.10.053
  • PRITCHARD J.K., STEPHENS M., & DONNELLY P., 2000. - Inference of population structure using multilocus genotype data. Genetics, 155: 945-959. https://doi.org/10.1093/ genetics/155.2.945
  • R CORE TEAM, 2015. - R: a language and environment for statistical computing. R Foundation for Statistical Computing. Vienna, Austria.
  • RAYMOND M. & ROUSSET F., 1995. - GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. J. Hered., 86: 248-249. https://doi.org/10.1093/oxfordjournals. jhered.a111573
  • RIPLEY B., BATES D., HORNIK K., GEBHARDT A. & FIRTH D., 2011. - Package 'MASS'. Available at: cran.r-project.org/ web/packages/MASS
  • ROUSSET F., 2008. - Genepop'007: a complete reimplementation of the Genepop software for Windows and Linux. Mol. Ecol. R e s o u r., 8: 1 0 3- 1 0 6. https://doi.org/10.1111/j.1471- 8286.2007.01931.x
  • RUTTENBERG B.I., HAMILTON S.L., HICKFORD M.J.H., PARADIS G.L., SHEEHY M.S., STANDISH J.D., BEN-TZVI O. & WARNER R.R., 2005. - Elevated levels of trace elements in cores of otoliths and their potential for use as natural tags. Mar. Ecol. Prog. Ser., 297: 273-281. https://doi.org/10.3354/ meps297273
  • SCHUELKE M., 2000. - An economic method for the fluorescent labeling of PCR fragments. Nat. Biotechnol., 18: 233-234. https://doi.org/10.1038/72708
  • SHAM P.C. & PURCELL S.M., 2014. - Statistical power and significance testing in large-scale genetic studies. Nat. Rev. Genet., 15: 335-346. https://doi.org/10.1038/nrg3706
  • SMITH W.E. & KWAK T.J., 2014. - Otolith microchemistry of tropical diadromous fishes: spatial and migratory dynamics. J. Fish Biol., 84: 913-928. https://doi.org/10.1111/jfb.12317
  • SORENSEN P.W. & HOBSON K.A., 2005. - Stable isotope analysis of amphidromous Hawaiian gobies suggests their larvae spend a substantial period of time in freshwater river plumes. Environ. Biol. Fish., 74: 31-42. https://doi.org/10.1007/s10641- 005-3212-6
  • TAYLOR M.J., GRAYNOTH E. & JAMES G.D., 2000. - Abundance and daytime vertical distribution of planktonic fish larvae in an oligotrophic South Island lake. Hydrobiologia, 421: 41-46. https://doi.org/10.1023/A:1003965116777
  • THOMAS O.R., GANIO K., ROBERTS B.R. & SWEARER S.R., 2017. - Trace element-protein interactions in endolymph from the inner ear of fish: Implications for environmental reconstructions using fish otolith chemistry. Metallomics, 9: 239-249. https://doi.org/10.1039/c6mt00189k
  • TOWNSEND S.M., KING T.M. & JAMIESON I.G., 2012. - Isolation and characterisation of microsatellite markers from the South Island robin (Petroica australis). Conserv. Genet. Resour., 4: 633-636. https://doi.org/10.1007/s12686-012- 9610-0
  • VARGAS C.A., MARTINEZ R.A., SAN MARTIN A., AGUAYO M., SILVA N. & TORRES R., 2011. - Allochthonous subsidies of organic matter across a lake-river-fjord landscape in the Chilean Patagonia: implications for marine zooplankton in inner fjord areas. Cont. Shelf Res., 31: 187-201. https://doi. org/10.1016/j.csr.2010.06.016
  • WARBURTON M.L., REID M.R., STIRLING C.H. & CLOSS G.P., 2017. - Validation of depth-profiling LA-ICP-MS in otolith applications. Can. J. Fish. Aquat. Sci., 74: 572-581. https:// doi.org/10.1139/cjfas-2016-0063
  • WARBURTON M.L., JARVIS M.G. & CLOSS G.P., 2018. - Otolith microchemistry indicates regional philopatry in the larval phase of an amphidromous fish (Gobiomorphus hubbsi). N. Z. J. Mar. Freshw. Res., 52: 398-408. https://doi.org/10.1080/002 88330.2017.1421237
  • WATERS J.M., ESA Y.B. & WALLIS G.P., 1999. - Characteriza- tion of microsatellite loci from a New Zealand freshwater fish (Galaxias vulgaris) and their potential for analysis of hybridization in Galaxiidae. Mol. Ecol., 8: 1080-1082. https://doi. org/10.1046/j.1365-294X.1999.00655_4.x
  • WATERS J.M., CRAW D., YOUNGSON J.H. & WALLIS G.P., 2001. - Genes meet geology: fish phylogeographic pattern reflects ancient, rather than modern, drainage connections. Evolution,55:1844-1851.https://doi.org/10.1111/j.0014-3820.2001. tb00833.x
  • WATERS J.M., ROWE D.L., BURRIDGE C.P. & WALLIS G.P., 2010. - Gene trees versus species trees: Reassessing life-history evolution in a freshwater fish radiation. Syst. Biol., 59: 504- 517. https://doi.org/10.1093/sysbio/syq031
  • YAMASAKI Y.Y., NISHIDA M., SUZUKI T., MUKAI T. & WATANABE K., 2015. - Phylogeny, hybridization, and life history evolution of Rhinogobius gobies in Japan, inferred from multiple nuclear gene sequences. Mol. Phylogenet. Evol., 90: 20-33. https://doi.org/10.1016/j.ympev.2015.04.012