Published December 31, 2020 | Version v1

Needlepoint non-destructive internal tissue sampling for precious fish specimens

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Haÿ, Vincent, Mennesson, Marion I., Dettaï, Agnès, Bonillo, Céline, Keith, Philippe, Lord, Clara (2020): Needlepoint non-destructive internal tissue sampling for precious fish specimens. Cybium 44 (1): 73-79, DOI: 10.26028/cybium/2020-441-010, URL: http://dx.doi.org/10.26028/cybium/2020-441-010

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References

  • ARANISHI F., 2006. - Single fish egg DNA extraction for PCR amplification. Conserv. Genet., 7: 153-156. DOI: 10.1007/ s10592-005-5387-y
  • DAWSON C. E., 1985. - Indo-Pacific Pipefishes: Red Sea to the Americas. 230 p. Gulf Coast Research Laboratory, Ocean Spring.
  • DAWSON C.E., 1986. - Syngnathidae. Fishes of the North-eastern Atlantic and the Mediterranean, Vol. 2, pp. 628-639.
  • DENYS G.P.J., DETTAI A., PERSAT H., HAUTECOEUR M. & KEITH P., 2014. - Morphological and molecular evidence of three species of pikes Esox spp. (Actinopterygii, Esocidae) in France, including the description of a new species. C. R. Biol., 337(9): 521-534. DOI: 10.1016/j.crvi.2014.07.002
  • DOWLING T.E. & DEMARAIS B.D., 1993. - Evolutionary sig- nificance of introgressive hybridization in cyprinid fishes. Nature, 362(6419): 444. DOI: 10.1038/362444a0
  • GEIGER M.F., HERDER F., MONAGHAN M.T., ALMADA V., BARBIERI R., BARICHE M., BERREBI P., BOHLEN J., CASAL-LOPEZ M., DELMASTRO G.B., DENYS G.P.J., DETTAI A., DOADRIO I., KALOGIANNI E., KARST H., KOTTELAT M., KOVACIC M., LAPORTE M., LORENZONI M., MARCIC Z., OZULUG M., PERDICES A., PEREA S., PERSAT H., PORCELOTTI S., PUZZI C., ROBALO J., SANDA R., SCHNEIDER M., SLECHTOVA V., STOUM- BOUDI M., WALTER S. & FREYHOF J., 2014. - Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects barcoding accuracy of its freshwater fishes. Mol. Ecol. Resour., 14: 1210-1221. DOI: 10.1111/1755-0998.12257
  • GARRIGOS Y.E., HUGUENY B., KOERNER K., IBANEZ C., BONILLO C., PRUVOST P., CAUSSE R. CRUAUD C. & GAUBERT P., 2013. - Non-invasive ancient DNA protocol for fluid-preserved specimens and phylogenetic systematics of the genus Orestias (Teleostei: Cyprinodontidae). Zootaxa, 3640(3): 373-394. DOI: 10.11646/zootaxa.3640.3.3
  • HAMILTON H., SAARMAN N., SHORT G., SELLAS A.B., MOORE B., HOANG T., GRACE C.L., GOMON M., CROW K. & SIMISON W.B., 2017. - Molecular phylogeny and patterns of diversification in Syngnathid fishes. Mol. Phylogenet. Evol., 107: 388-403. DOI: 10.1016/j.ympev.2016.10.003
  • IVANOVA N.V., ZEMLAK T.S., HANNER R.H. & HEBERT P.D., 2007. - Universal primer cocktails for fish DNA barcoding. Mol. Ecol. Notes, 7(4): 544-548. DOI: 10.1111/j.1471-8286.20 07.01748.x
  • KARAISKOU N., TRIANAFYLLIDIS A., ALVAREZ P., LOPES P., GARCIA-VAZQUEZ E. & TRIANTAPHYLLIDIS C., 2007. - Horse mackerel egg identification using DNA method- ology. Mar. Ecol., 28: 429-434. DOI: 10.1111/j.1439-0485.200 7.00190.x
  • KEARSE M., MOIR R., WILSON A., STONES-HAVAS S., CHE- UNG M., STURROCK S., BUXTON S., COOPER A., MARKOWITZ S., DURAN C., THIERER T., ASHTON B., MEINTJES P. & DUMMOND A., 2012. - Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics, 28(12): 1647-1649. DOI: 10.1093/bioinformatics/bts199
  • KEITH P., LORD C., DARHUDDIN H., LIMMON G., SUKMO- NO T., HADIATY R. & HUBERT N., 2017. - Schismatogobius (Gobiidae) from Indonesia, with description of four new species. Cybium, 41(2): 195-211. DOI: 10.26028/cybium/ 2017-412-010
  • KOTTELAT M., 2013. - The fishes of the inland waters of South- east Asia: a catalogue and core bibliography of the fishes known to occur in freshwaters, mangroves and estuaries. Raffles Bull. Zool., suppl. 27: 1-663.
  • LONGO S.J., FAIRCLOTH B.C., MEYER A., WESTNEAT M.W., ALFARO M.E. & WAINWRIGHT P.C., 2017. - Phylogenomic analysis of a rapid radiation of misfit fishes (Syngnathiformes) using ultraconserved elements. Mol. Phylogenet. Evol., 113: 33-48.
  • MARTINEZ G., SHAW E.M., CARRILLO M. & ZANUY S., 1998. - Protein salting-out method applied to genomic DNA isolation from fish whole blood. Biotechniques, 24(2): 238-239. DOI: 10.2144/98242bm14
  • MENNESSON M.I. & KEITH P., 2017. - Evidence of two species currently under the name of Eleotris fusca (Gobioidei: Eleotridae) in the Indian Ocean. Cybium, 41: 213-220. DOI: 10.26028/ cybium/2017-412-011
  • MESSING J., 1983. - New M13 vectors for cloning. Methods Enzymol., 101: 20-78. DOI: 10.1016/0076-6879(83)01005-8
  • MIESEN F.W., DROPPELMANN F., HULLEN S., HADIATY R.K. & HERDER F., 2016. - An annotated checklist of the inland fishes of Sulawesi. Bonn Zool. Bull., 64(2): 77-106.
  • PADIAL J.M., MIRALLES A., DE LA RIVA I. & VENCES M., 2010. - The integrative future of taxonomy. Front. Zool., 7(1): 16. DOI: 10.1186/1742-9994-7-16
  • RENOUX L.P., DOLAN M.C., COOK C.A., SMIT N.J. & SIKKEL P.C., 2017. - Developing an apicomplexan DNA barcoding system to detect blood parasites of small coral reef fishes. J. Parasitol., 103(4): 366-376. DOI: 10.1645/16-93
  • ROHLAND N., SIEDEL H. & HOFREITER M., 2004. - Nondestructive DNA extraction method for mitochondrial DNA analyses of museum specimens. BioTechniques, 36: 814-821. DOI: 10.2144/04365ST05
  • SCHRADER C., SCHIELKE A., ELLERBROEK L. & JOHNE R., 2012. - PCR inhibitors - occurrence, properties and removal. J. Appl. Microbiol., 113: 1014-1026. DOI: 10.1111/j.1365-2672.2 012.05384.x
  • SCRIBNER K.T., PAGE K.S. & BARTON M.L., 2000. - Hybridization in freshwater fishes: a review of case studies and cytonu- clear methods of biological inference. Rev. Fish Biol. Fish., 10(3): 293-323. DOI: 10.1023/A:1016642723238
  • TARNECKI A.M., RHODY N.R. & WALSH C.J., 2018. - Health characteristics and blood bacterial assemblages of healthy captive red drum: implications for aquaculture and fish health man- agement. J. Aquat. Anim. Health, 30(4): 339-353. DOI: 10.1002/aah.10047
  • WARD R.D., ZEMLAK T.S., INNES B.H., LAST P.R. & HEBERT P.D., 2005. - DNA barcoding Australia's fish species. Philos. Trans. R. Soc. B: Biol. Sci., 360(1462): 1847-1857. DOI: 10.1098/rstb.2005.1716
  • WEIGT L.A., BALDWIN C.C., DRISKELL A., SMITH D.G., ORMOS A. & REYIER E.A., 2012. - Using DNA Barcoding to assess Caribbean reef fish biodiversity: expanding taxonomic and geographic coverage. Plos ONE, 7(7): e41059. DOI: 10.1371/journal.pone.0041059
  • WINNEPENNINCKX B., BACKELJAU T. & DE WACHTER R., 1993. - Extraction of high molecular weight DNA from mol- luscs. Trends Genet., 9(12): DOI: 407. 10.1016/0168- 9525(93)90102-n
  • ZHANG Q., TIERSCH T.R. & COOPER R.K., 1994. - Rapid isolation of DNA for genetic screening of catfishes by polymerase chain reaction. Trans. Am. Fish. Soc., 123(6): 997-1001. DOI: 10.1577/1548-8659(1994)123<0997:RIODFG>2.3.CO;2