Published June 29, 2024
| Version v1
Preprint
Open
PRISM: 3D MouseBrain Raw Images and Labeld RNA Spots
Authors/Creators
- Chang, Tianyi (Researcher)1
- Zhao, Shihui (Researcher)1
- Deng, Kunyue (Researcher)1, 2
- Liao, Zhizhao (Researcher)1, 3
- Tang, Mingchuan (Researcher)1, 4
- Zhu, Yanxi (Researcher)1
- Han, Wuji (Researcher)1, 4
- Yu, Chenxi (Researcher)1
- Fan, Wenyi (Researcher)1
- Jiang, Mengcheng (Researcher)1
- Wang, Guanbo (Researcher)1, 3, 5
- Liu, Dongfang (Researcher)6
- Peng, Jirun (Researcher)6, 7
- Pang, Yuhong (Researcher)1
- Fei, Peng (Researcher)8
- Wang, Jianbin (Researcher)3, 9
- Zheng, Chunhong (Contact person)1, 10, 11
- Huang, Yanyi (Contact person)1, 2, 3, 5
- 1. Biomedical Pioneering Innovation Center (BIOPIC), Peking University International Cancer Institute, School of Life Sciences, Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking University, Beijing 100871, China
- 2. College of Chemistry and Molecular Engineering, Beijing National Laboratory for Molecular Sciences, Peking University, Beijing 100871, China
- 3. Changping Laboratory, Yard 28, Science Park Rd., Changping District, Beijing, China
- 4. Yuanpei College, Peking University, Beijing 100871, China
- 5. Institute for Cell Analysis, Shenzhen Bay Laboratory, Shenzhen 518132, China
- 6. Department of Surgery, Beijing Shijitan Hospital, Capital Medical University, Beijing 100038, China
- 7. Ninth School of Clinical Medicine, Peking University, Beijing 100038, China
- 8. School of Optical and Electronic Information – Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, Wuhan 430074, China
- 9. School of Life Sciences, Tsinghua University, Beijing 100084, China
- 10. Key Laboratory of Carcinogenesis and Translational Research (Ministry of Education/Beijing), Peking University Cancer Hospital & Institute, Beijing 100142, China
- 11. State Key Laboratory of Molecular Oncology, Peking University Health Science Center, Beijing 100191, China
Description
This repo contains raw image data, labeled rna spots(mapped genes) and expression matrix derived after segmentation. The data are used in article:
PRISM: Multiplexed Profiling of RNA In-Situ through Single-round of Imaging in Three-Dimensional Tissue
Files
PRISM_data_publication_MouseBrain3D.md
Files
(39.6 GB)
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md5:6cb5de47d6203a51eff5405fdfb1e1f1
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md5:d6c89fcd1da53b48da44f1ed4f50e057
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md5:7a76d7ffb72b5762ee936f6216865fd8
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md5:9e24e69c159f09fc5a43df396924bf82
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2.8 kB | Preview Download |
Additional details
Related works
- Is source of
- Preprint: 10.1101/2024.06.29.601330 (DOI)