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Published December 31, 2017 | Version v1
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Description of a New Brackish Water Ciliate, Uronychia xinjiangensis n. sp. (Ciliophora, Euplotida) Based on Morphology, Morphogenesis and Molecular Phylogeny

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Shi, Xinlu, Liu, Guijie, Wang, Chundi, Hu, Xiaozhong (2017): Description of a New Brackish Water Ciliate, Uronychia xinjiangensis n. sp. (Ciliophora, Euplotida) Based on Morphology, Morphogenesis and Molecular Phylogeny. Acta Protozoologica 56 (4): 303-315, DOI: 10.4467/16890027AP.17.026.7828, URL: https://www.mendeley.com/catalogue/07710d4c-3830-3922-b230-f0aa3fb7385f/

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Publication: 10.1093/nar/gkq443 (DOI)
Has part
Taxonomic treatment: 10.5281/zenodo.12637375 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/E52BB330174CFFD9FCE9F8CA3992FE39 (URL)
Figure: 10.5281/zenodo.12637667 (DOI)
Figure: 10.5281/zenodo.12637669 (DOI)
Figure: 10.5281/zenodo.12637671 (DOI)
Figure: 10.5281/zenodo.12637673 (DOI)
Figure: 10.5281/zenodo.12637675 (DOI)
Figure: 10.5281/zenodo.12637677 (DOI)
Figure: 10.5281/zenodo.12637679 (DOI)
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Dataset: https://www.gbif.org/dataset/2b92fc4f-b63e-4e4d-99ce-24ba05dd71a1 (URL)

References

  • Agamaliev F. G. (1971) Complements to the fauna of psammophilic ciliates of the western coast of the Caspian Sea. Acta Protozool. 8: 379-404 (in Russian with English summary)
  • Berger H. (1999) Monograph of the Oxytrichidae (Ciliophora, Hypotrichia). Monogr. Biol. 78: 1-1080
  • Borror A. C. (1972) Tidal marsh ciliates (Protozoa): morphology, ecology, systematics. Acta Protozool. 10: 29-71
  • Bullington W. E. (1940) Some ciliates from Tortugas. Pap. Tortugas Lab. 32: 179-221
  • Calkins G. N. (1911) Regeneration and cell division in Uronychia. J. Exp. Zool. 10: 95-116
  • Carey P. G. (1992) Marine interstitial ciliates. Chapman and Hall, London
  • Chen Z., Song W. (2001) Phylogenetic positions of Uronychia transfuga and Diophrys appendiculata (Euplotida, Hypotrichia, Ciliophora) within hypotrichous ciliates inferred from the small subunit ribosomal RNA gene sequences. Eur. J. Protistol. 37: 291-301
  • Chen Z., Song W., Warren A. (2003) Species separation and identification of Uronychia spp. (Hypotrichia: Ciliophora) using RAPD Fingerprinting and ARDRA Riboprinting. Acta Protozool. 42: 83-90
  • Curds C. R., Wu I. C. H. (1983) A review of the Euplotidae (Hypotrichida, Ciliophora). Bull. Br. Mus. Nat. Hist. (Zool.) 44: 191-247
  • Fan Y., Warren A., Al-Farraj S. A., Chen X., Shao C. (2013) Morphology and SSU rRNA gene-based phylogeny of two Diophrys -like ciliates from northern China, with notes on morphogenesis of Pseudodiophrys nigricans (Protozoa, Ciliophora). J. Morphol. 274: 395-403
  • Gao F., Huang J., Zhao Y., Li L. F., Liu W.W., Miao M., Zhang Q. Q., Li J.M., Yi Z. Z., El-Serehy H. A., Warren A., Song W. (2017) Systematic studies on ciliates (Alveolata, Ciliophora): progress and achievements based on molecular information. Eur. J. Protistol. 61: 409-423
  • Hall T. A. (1999) BioEdit : a user-friendly biological sequence alignment editor and analysis program fro Windows 95/98/NT. Nucleic Acids Symp. Ser. 41: 95-98
  • Hill B. F. (1990) Uronychia transfuga (O. F. Muller, 1786) Stein, 1859 (Ciliophora, Hypotrichida, Uronychidae): cortical structure and morphogenesis during division. J. Protozool. 37: 99- 107
  • Hu X. (2008) Cortical structure in non-dividing and dividing Diophrys japonica spec. nov. (Ciliophra, Euplotida) with notes on morphological variation. Eur. J. Protistol. 44: 115-129
  • Huang J., Chen Z., Song W., Berger H. (2014) Three-gene based phylogeny of the Urostyloidea (Protista, Ciliophora, Hypotricha), with notes on classification of some core taxa. Mol. Phylogenet. Evol. 70: 337-347.
  • Huang J., Dunthorn M., Song W. (2012) Expanding character sampling for the molecular phylogeny of euplotid ciliates (Protozoa, Ciliophora) using three markers, with a focus on the family Uronychiidae. Mol. Phylogenet. Evol. 63: 598-605
  • Kahl A. (1932) Urtiere oder Protozoa. I: Wimpertiere oder Ciliata (Infusoria), 3. Spirotricha. Tierwelt Dtl. 25: 399-650
  • Kattar M. R. (1970) Estudo dos protozoarios cilados psamofilos do litoral Brasileiro. Zool. Boil. Mar. N.S. 27: 123-206
  • Kim S. J., Min G. S. (2011) First record of three Uronychia species (Ciliophora: Spirotrichea: Euplotida) from Korea. Korean J. Syst. Zool. 27: 25-33
  • Kirby H. (1934) Some ciliates from salt marshes in California. Arch. Protistenkd. 82: 114-133
  • Kumar S., Bharti D., Marinsalti S., Insom E., Terza A. (2014) Morphology, morphogenesis, and molecular phylogeny of Paraparentocirrus sibillinensis n. gen., n. sp., a "Stylonychine Oxytrichidae" (Ciliophora, Hypotrichida) without transverse cirri. J. Eukaryot. Microbiol. 61: 247-259
  • Li J., Chen X., Xu K. (2016) Morphology and small subunit rDNA phylogeny of two new marine urostylid ciliates, Caudiholosticha marina sp. nov. and Nothoholosticha flava sp. nov. (Ciliophora, Hypotrichia). J. Eukaryot. Microbiol. 63: 460-470
  • Lu X., Huang J., Shao C., Al-Farraj S. A., Gao S. (2017) Morphology and morphogenesis of a novel saline soil hypotrichous ciliate, Gonostomum sinicum nov. spec. (Ciliophora, Hypotrichia, Gonostomatidae), including a report on the small subunit rDNA sequence. J. Eukaryot. Microbiol. 64: 632-646
  • Luo X., Li L., Wang C., Bourland W., Lin X., Hu X. (2017) Morphologic and phylogenetic studies of two hypotrichous ciliates, with notes on morphogenesis in Gastrostyla steinii Engelmann, 1862 (Ciliophora, Hypotrichia). Eur. J. Protistol. 60: 119-133
  • Lynn D. H. (2008) The ciliated protozoa: characterization, classification and guide to the literature, third ed. Springer, Dordrecht
  • Mansfeld K. (1923) 16 neue oder wenig becannte marine Infusorien. Arch. Protistenkd. 46: 97-140
  • Medlin L., Elwood H. L., Stickel S., Sogin M. L. (1988) The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions. Gene 71: 491-499
  • Muller O. F. (1786) Animalcula infusoria fluviatilia et marina, quae Detexit, Systematice Descripsit et ad Vivem Delineari Curavit. Molleri, Havniae
  • Nylander J. A. A. (2004) MrModeltest 2.2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden
  • Sela I., Ashkenazy H., Katoh K., Pupko T. (2015) GUIDANCE2: accurate detection of unreliable alignment regions accounting for the uncertainty of multiple parameters. Nucleic Acids Res. 43 (Web Server issue): W7-W14; doi: 10.1093/nar/gkq443
  • Shao C., Ma H., Gao S., Al-Rasheid A. K., Song W. (2010) Reevaluation of cortical developmental patterns in Euplotes (s.l.), including a morphogenetic redescription of E. charon (Protozoa, Ciliophora, Euplotida). Chin. J. Oceanol. Limnol. 28: 593-602
  • Shen Z., Shao C., Gao S., Lin X., Li J., Hu X., Song W. (2009) Description of the rare marine ciliate, Uronychia multicirrus Song, 1997 (Ciliophora; Euplotida) based on morphology, morphogenesis and SS rRNA gene sequence. J. Eukaryot. Microbiol. 56: 296-304
  • Shi X. (2006) The application of improved protargol method in Paraurostyla. Bull. Biol. 41: 52 (in Chinese)
  • Shi X., Song W. (1999) Morphogenetic studies on Uronychia setigera (Ciliophora, Hypotrichida). Acta Hydrobiol. Sin. 23: 146- 150 (in Chinese with English summary)
  • Song W. (1996) Morphogenetic studies on Uronychia uncinata (Protozoa, Ciliophora) during its asexual division. Acta Oceanol. Sin. 1 5: 93-99
  • Song W. (1997) On the morphology and infraciliature of a new marine hypotrichous ciliate, Uronychia multicirrus sp. n. (Ciliophora: Hypotrichida). Acta Protozool. 36: 279-285
  • Song W. (1999) Redefinition of the marine ciliate genus, Uronychia. In: Song, W. et al. (eds.), Progress in Protozoology. Qingdao Ocean University Press, Qingdao. p. 177-187
  • Song W., Wilbert N. (1997) Morphological investigations on some free living ciliates (Protozoa, Ciliophora) from China seas with description of a new hypotrichous genus, Hemigastrostyla nov. gen. Arch. Protistenkd. 148: 413-444
  • Song W., Shao C., Yi Z., Li L., Warren A., Al-Rasheid K. A. S., Yang J. (2009) The morphology, morphogenesis and SSrRNA gene sequence of a new marine ciliate, Diophrys apoligothrix spec. nov. (Ciliophora; Euplotida). Eur. J. Protistol. 45: 38-50
  • Song W., Wilbert N., Chen Z., Shi X. (2004) Considerations on the position of Uronychia and related euplotids based on the data of ontogeny and 18S rRNA gene sequence analyses, with morphogenetic redescription of Uronychia setigera Calkins, 1902 (Ciliophora: Euplotida). Acta Protozool. 43: 313-328
  • Stamatakis A., Hoover P., Rougemont J. (2008) A rapid bootstrap algorithm for the RAxML web-servers. Syst. Biol. 75: 758-771
  • Stein F. (1859) Uber die wahrend der verflossenen Sommerferien in der Ostsee bei Wismar beobachteten Infusorienformen, unter denen sich mehrere neue Gattungen befanden. Abh. K. bohm. Ges. Wiss. 10 (year 1857): 62-63
  • Tamura K., Stecher G., Peterson D., Filipski A., Kumar S. (2013) MEGA6: Molecular evolutionary genetics analysis version 6.0. Mol. Biol. Evol. 30: 2725-2729
  • Taylor C. V. (1928) Protoplasmic reorganization in Uronychia uncinata n. sp. during binary fission and regeneration. Physiol. Zool. 1: 1-26
  • Valbonesi A., Luporini P. (1990) A new species of Uronychia (Ciliophora, Hypotrichida) from Antarctica: Uronychia antarctica. Boll. Zool. 57: 365-367
  • Wang C. C., Nie D. (1932) A survey oft the marine protozoa of Amoy. Contr. Biol. Lab. Sci. Soc. China Zool. Ser. 8: 285-385
  • Wallengren J. (1900) Zur Kenntnis der vergleichenden Morphologie der hypotrichen Infusorien. Bih. K. Svenska Vetensk. Akad Handl. 26: 1-31
  • Wilbert N. (1995) Benthic ciliates of salt lakes. Acta Protozool. 34: 271-288
  • Wilbert N., Kahan D. (1981) Ciliates of solar lake on the Red Sea shore. Arch. Protistenkd. 124: 70-95
  • Yi Z., Song W., Clamp J. C, Chen Z., Gao S., Zhang Q. (2009) Reconsideration of systematic relationships within the order Euplotida (Protista, Ciliophora) using new sequences of the gene coding for small-subunit rRNA and testing the use of combined data sets to construct phylogenies of the Diophrys-complex. Mol. Phylogen. Evol. 50: 599-607
  • Young D. B. (1922) A contribution to the morphology and physiology of the genus Uronychia. J. Exp. Zool. 36: 353-395