There is a newer version of the record available.

Published May 20, 2024 | Version 1.1
Dataset Open

GARNET Database

Authors/Creators

  • 1. ROR icon University of California, Berkeley

Description

This repository contains all data described in our recent manuscript:

Yekaterina Shulgina*, Marena I. Trinidad*, Conner J. Langeberg*, Hunter Nisonoff*, Seyone Chithrananda*, Petr Skopintsev*, Amos J. Nissley*, Jaymin Patel, Ron S. Boger, Honglue Shi, Peter H. Yoon, Erin E Doherty, Tara Pande, Aditya M. Iyer, Jennifer A. Doudna, Jamie H. D. Cate*. RNA language models predict mutations that improve RNA function. bioRxiv 2024.04.05.588317; doi: https://doi.org/10.1101/2024.04.05.588317

* Contributed equally

Descriptions of all files are available in the enclosed README.md. Associated code for the manuscript is located here: https://github.com/Doudna-lab/GARNET_DL

Files

GARNET_Database.zip

Files (1.2 GB)

Name Size Download all
md5:a9a2b60b59d317fda15b15ed586c1184
158.0 MB Preview Download
md5:e855f039b4b38d4acd37b5240bd46c2e
1.0 GB Preview Download

Additional details

Related works

Is published in
Dataset: 38617247 (PMID)

Dates

Available
2024-05-20

Software

Repository URL
https://github.com/Doudna-lab/GARNET_DL
Programming language
Python
Development Status
Active