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Published April 26, 2018 | Version v0.2.2
Software Open

hbc/bcbioRNASeq: bcbioRNASeq 0.2.2

Authors/Creators

  • 1. Harvard (@hbc)
  • 2. Harvard Chan School of Public Health
  • 3. Harvard School of Public Health

Description

  • Split out assertive imports so we can pin on bioconda.
  • Improved package documentation.
  • Improve dlabel consistency in plotPCA() functions to match plotMeanAverage() and plotVolcano().
  • Improved automatic title labeling in plotDEGPCA(), matching the other DEG functions. Also added directionality to plotDEGPCA().
  • Added DESeqDataSet method support to plotCorrelationHeatmap(), using the normalized counts.
  • reusltsTables() now writes local files to tempdir() when Dropbox mode is enabled using dropboxDir.

Files

hbc/bcbioRNASeq-v0.2.2.zip

Files (5.2 MB)

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md5:35144bc4625bfc7d71f30b19e8c2ed18
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Additional details

Related works

Is supplement to
https://github.com/hbc/bcbioRNASeq/tree/v0.2.2 (URL)