Published March 19, 2018 | Version v1
Conference paper Open

Strand-seq Enables Reliable Separation of Long Reads by Chromosome via Expectation Maximization

Authors/Creators

Description

Given file contains fastq formatted Strand-seq reads originating from 132 single-cell libraries. The fastq file was generated from mapped BAM files containing pair-end reads. In this file only first mate of each pair is reported and at the same time chromosome location, flag and library name is appended to each read name.

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md5:6ca1f9f84a671f45b436fbfd7c779171
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Additional details

References

  • Porubský, D. et al. Direct chromosome-length haplotyping by single-cell sequencing. Genome Res. 26, 1565–1574 (2016).