Published June 12, 2024 | Version v0.7
Software Open

mne-connectivity

Description

<!-- Release notes generated using configuration in .github/release.yml at main -->

What's Changed

  • [v0.6 dev] New version by @adam2392 in https://github.com/mne-tools/mne-connectivity/pull/122
  • MAINT: Use git by @larsoner in https://github.com/mne-tools/mne-connectivity/pull/130
  • [MAINT] Add docstrings to spectral time methods by @adam2392 in https://github.com/mne-tools/mne-connectivity/pull/128
  • [ENH] Fix doc according to ruuskas comment for mne-python like docstring by @adam2392 in https://github.com/mne-tools/mne-connectivity/pull/131
  • [DOC] Example comparing spectral connectivity computed over time or over trials by @Avoide in https://github.com/mne-tools/mne-connectivity/pull/129
  • [ENH] Added n_con arg to function call by @Avoide in https://github.com/mne-tools/mne-connectivity/pull/133
  • [DOC] Fixes #134. Indicate how to load connectivity data from disk by @moritz-gerster in https://github.com/mne-tools/mne-connectivity/pull/135
  • [CI] Check reqs by @adam2392 in https://github.com/mne-tools/mne-connectivity/pull/139
  • Upgrade to python 3.8 min by @adam2392 in https://github.com/mne-tools/mne-connectivity/pull/140
  • Expose colormap in plot_sensors_connectivity by @drammock in https://github.com/mne-tools/mne-connectivity/pull/141
  • [ENH, WIP] Add multivariate connectivity methods by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/138
  • [MRG] Bump website theme by @drammock in https://github.com/mne-tools/mne-connectivity/pull/144
  • MAINT: Use explicitly public APIs by @larsoner in https://github.com/mne-tools/mne-connectivity/pull/145
  • [MAINT] Adding citation workflow by @adam2392 in https://github.com/mne-tools/mne-connectivity/pull/147
  • MAINT: Update CIs by @larsoner in https://github.com/mne-tools/mne-connectivity/pull/154
  • [ENH] Add support for ragged connections with multivariate methods with padding by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/142
  • [MAINT] Fix failing unit tests & update CI packages by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/157
  • [MAINT] Refactor bivariate and multivariate methods into separate files by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/156
  • [BUG] Inconsistent lengths of indices and rank does not raise an error by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/158
  • [MAINT] Replace setup.py with pyproject.toml by @adam2392 in https://github.com/mne-tools/mne-connectivity/pull/160
  • [MAINT] Run black, isort, ruff, and other auto-linters on entire package by @adam2392 in https://github.com/mne-tools/mne-connectivity/pull/159
  • [CI] Fix azure by @adam2392 in https://github.com/mne-tools/mne-connectivity/pull/161
  • [RELEASE] V0.6 by @adam2392 in https://github.com/mne-tools/mne-connectivity/pull/162
  • [CI] Fix CIs by @adam2392 in https://github.com/mne-tools/mne-connectivity/pull/164
  • MAINT: Deploy maint/* branch by @larsoner in https://github.com/mne-tools/mne-connectivity/pull/166
  • type-check data input to spectral_connectivity_time by @drammock in https://github.com/mne-tools/mne-connectivity/pull/167
  • Fix failing unit tests by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/172
  • [DOC] Add methods list to epochs function and fix formatting of list in time function by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/171
  • [BUG] Fix memory error spectral_connectivity_time by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/175
  • [BUG] n_jobs=-1 not working in spectral_connectivity_epochs by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/177
  • [ENH] Add connectivity simulation function by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/173
  • [ENH] Add support for multivariate coherency method (canonical coherence) by @orabe in https://github.com/mne-tools/mne-connectivity/pull/163
  • avoid FutureWarning from zero_mean default change by @drammock in https://github.com/mne-tools/mne-connectivity/pull/179
  • [DOC] Update install.rst to reflect pyproject.toml by @JonathanShor in https://github.com/mne-tools/mne-connectivity/pull/180
  • [MAINT] Fix codespell error by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/186
  • MAINT: Test on macOS arm64 by @larsoner in https://github.com/mne-tools/mne-connectivity/pull/187
  • [MAINT] Add logic for handling AverageTFRArray in old MNE versions by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/185
  • [ENH] Reduce compute time for multivariate coherency methods by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/184
  • [MAINT] Retry improve clarity, thumbnails, and fix mistakes in multivariate examples by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/196
  • [RELEASE] V0.7 by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/195
  • [MAINT] Add release workflow by @tsbinns in https://github.com/mne-tools/mne-connectivity/pull/198

New Contributors

  • @Avoide made their first contribution in https://github.com/mne-tools/mne-connectivity/pull/129
  • @moritz-gerster made their first contribution in https://github.com/mne-tools/mne-connectivity/pull/135
  • @tsbinns made their first contribution in https://github.com/mne-tools/mne-connectivity/pull/138
  • @orabe made their first contribution in https://github.com/mne-tools/mne-connectivity/pull/163
  • @JonathanShor made their first contribution in https://github.com/mne-tools/mne-connectivity/pull/180
  • @dependabot made their first contribution in https://github.com/mne-tools/mne-connectivity/pull/189
  • @pre-commit-ci made their first contribution in https://github.com/mne-tools/mne-connectivity/pull/191

Full Changelog: https://github.com/mne-tools/mne-connectivity/compare/v0.5...v0.7

Notes

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Files

mne-tools/mne-connectivity-v0.7.zip

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