Published August 1, 2024
| Version v1.5
Dataset
Open
ropebwt indices
Creators
Description
This repository provides BWTs of two large datasets in the ropebwt3 format:
- human100: 100 human haplotype assemblies (~300Gb on one strand)
- CommonBacteria: a subset of AllTheBacteria v0.2, excluding genomes in the "dustbin" and the "unknown" categories (~7.3Tb on one strand)
BWTs here include both the forward and the reverse complement strands. A more recent version of human index can be found here.
Files
Files
(46.1 GB)
| Name | Size | Download all |
|---|---|---|
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md5:127472e8806db89e37f2376cc01e7125
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1.4 GB | Download |
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md5:0c1175ab47937e317741bb2a9573ca37
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14.4 GB | Download |
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md5:c2bb1315148bb9a95ebe11f34ceddbf0
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20.3 GB | Download |
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md5:4dee8ef36bb50d9b897a977c4c27bb86
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1.0 MB | Download |
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md5:f262100a0e704a4ede79e11a399833ec
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53 Bytes | Download |
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md5:746c55ec8dca16fa0819ecdd93c84590
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266.8 kB | Download |
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md5:d4ff272a9d3bde5b700e54c8d94853f7
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4.7 GB | Download |
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md5:fe43aa5a9d5fce003e727751d3290c7d
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5.3 GB | Download |
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md5:82c594d3c5c953bb9e8ee9b8a8ce0c13
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15.4 kB | Download |
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md5:df009339548319d0604f49febd4f3525
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47 Bytes | Download |
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md5:c04356ddd00902fd02849fda0ebeac3c
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26.0 MB | Download |
Additional details
Related works
- Is continued by
- Dataset: 10.5281/zenodo.13948741 (DOI)
- Is derived from
- Dataset: 10.5281/zenodo.10703141 (DOI)
- Is published in
- Journal article: 10.1093/bioinformatics/btae717 (DOI)
Dates
- Available
-
2024-08-01
Software
- Repository URL
- https://github.com/lh3/ropebwt3
- Programming language
- C