Published May 29, 2024 | Version v1
Dataset Open

CD4+ T cells re-wire granuloma cellularity and regulatory networks, promoting immunomodulation following Mtb reinfection

  • 1. ROR icon Massachusetts Institute of Technology
  • 2. ROR icon Broad Institute
  • 3. ROR icon Ragon Institute of MGH, MIT and Harvard

Description

Here we include the necessary .ipynb, .h5ad, and .rds (used for cell-cell interaction analyses) files used in our work: "Immunomodulatory re-wiring of granuloma cellularity and regulatory networks by CD4 T cells following Mtb reinfection"

Files

ipynb_scRNA_Reinfection_CD4_Tcell_depletion.zip

Files (5.9 GB)

Name Size Download all
md5:f7dd53c978238163625cbd61f0733f4c
2.8 GB Download
md5:0b639db75e908429ab0af6c9dd48b954
1.0 GB Download
md5:b8f8abb83076df09e71b9e198894b5c7
410.5 MB Download
md5:781127954023914ac617b0ff20434975
161.7 MB Preview Download
md5:50e4123af66a9f4703f92150c6499eae
1.0 GB Download
md5:9d8ae426b0d68ad110350a46773bb251
428.4 MB Download

Additional details

Funding

National Institutes of Health
IMPAcTB 75N93019C00071

Software

Programming language
Python , R