Published July 22, 2024 | Version v1
Dataset Open

Tailored 3D microphantoms: an essential tool for quantitative phase tomography analysis of organoids

Authors/Creators

  • 1. ROR icon Warsaw University of Technology
  • 2. ROR icon CEA LETI
  • 3. ROR icon Institut de Génomique Fonctionnelle de Lyon

Description

Raw measurement data and processed results for the paper "Tailored 3D microphantoms: An essential tool for quantitative phase tomography analysis of organoids", Biocybern. Biomed. Eng. 45 (2025) 247–257. https://doi.org/10.1016/j.bbe.2025.03.003.

Measurement data.zip - Archive contains .bmp files with raw images captured by the cameras in corresponding systems. Included .txt files contain key system parameters used for demodulation and reconstruction.

3D refractive index reconstructions.mat - MATLAB structure file containing expected and measured 3D RI distributions for the corresponding systems and organoid samples. 

 

Files

Measurement data.zip

Files (8.3 GB)

Name Size
md5:1d709d8436ccb93fcf0be23d0f6cb5bd
1.2 GB Download
md5:e80a6eadc862fbfaaf468e36dbe330f0
7.1 GB Preview Download

Additional details

Funding

European Commission
REVEAL - Neuronal microscopy for cell behavioural examination and manipulation 101016726
Agence Nationale de la Recherche
LIVE 3D-CNN ANR-21-CE19-0020
Ministry of Science and Higher Education
Polish Metrology PM/SP/0079/2021/1
Warsaw University of Technology
Excellence Initiative: Research University
National Science Centre
[TRUE_QPI] High spatio-temporal throughput truly 2D/3D quantitative phase imaging at single-cell level 2023/48/Q/ST7/00172