PSCP Data and Results for PIPPack
Description
Evaluation datasets and results for the protein side chain packing (PSCP) task from PIPPack: https://www.biorxiv.org/content/10.1101/2023.08.03.551328v2.
This repository contains the CASP13, CASP14, CASP15, CASP15+context, and Top2018 test sets created as described in the PIPPack paper. The native, ground-truth structures are found in the "native" subdirectory; other subdirectories contain predictions made by PSCP methods. Subdirectories also contain some statistics and results in the form of .txt files.
The CASP15+context results make use of an additional Python script (PIPPack/data/extract_targets_from_full_targets.py) found in the PIPPack GitHub repository (https://github.com/Kuhlman-Lab/PIPPack).
Citing this work: If you choose to use any of these datasets or results for your own research, please cite this repository and the PIPPack paper: https://www.biorxiv.org/content/10.1101/2023.08.03.551328v2.
Files
pippack_pscp_results.zip
Files
(927.5 MB)
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Additional details
Dates
- Created
-
2024-05-21Created repository
Software
- Repository URL
- https://github.com/Kuhlman-Lab/PIPPack
- Programming language
- Python
- Development Status
- Active