Published May 7, 2024
| Version v1
Dataset
Open
Multi-antigen imaging data of skin tissue samples from cutaneous T cell lymphoma, atopic dermatitis, and psoriasis patients
Authors/Creators
Description
Data
Multi-antigen imaging data for 69 skin tissue samples (21 cutaneous T cell lymphoma (CTCL), 23 atopic dermatitis (AD), and 25 pseudolymphoma (PSO)), obtained from 27 patients (8 CTCL, 7 AD, 12 PSO) treated at the University Hospital Erlangen. Each sample contains at least 36 protein channels, each of resolution 512 X 512 pixels. The data were generated using multi-epitope ligand cartography (MELC) (https://doi.org/10.1038/nbt1250, https://doi.org/10.1007/3-540-36459-5_8).
Metadata
For each sample, we information on sex, age, and condition of the corresponding patient. Samples and patients are numbered as S01 through S69 and P01 through P27, respectively.
Structure of the repository
- The file metadata.csv contains the metadata.
- The archive data.zip contains one directory for each sample, named with the sample numbers S01 through S69.
- The directories for the individual samples contain images named <marker>-<flourescent protein>.tif, where <marker> is the name of the quantified protein marker and <flourescent protein> is the name of the flourescent protein that was used for image acquisition.
Files
data.zip
Files
(1.3 GB)
| Name | Size | Download all |
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md5:f90d1e824b737838fda66f458023b50d
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1.3 GB | Preview Download |
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md5:585d14efe5b0b100bfebf7bdaa4a0aff
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2.1 kB | Preview Download |
Additional details
Related works
- Is published in
- Preprint: 10.1101/2024.05.17.594629 (DOI)