There is a newer version of the record available.

Published May 4, 2024 | Version v1.9.1
Software Open

AstrobioMike/bit: v1.9.1

Authors/Creators

  • 1. NASA Ames Research Center

Description

  • added bit-get-test-data
    • currently only has metagenomics option, largely for testing the mg workflow
  • removed bit-median-ratio-norm as that is encompassed in bit-normalize-table
  • removed stub-bit-GTDB-tax-to-NCBI-tax as that type of path is no longer needed
    • the intent was for scenarios where we have MAGs we want to submit to NCBI, but have done GTDB taxonomic assignment, and need to have NCBI tax assignment for submission
    • but a better way would likely be to just do a different taxonomic assignment to NCBI, like with sourmash

Files

AstrobioMike/bit-v1.9.1.zip

Files (152.5 kB)

Name Size Download all
md5:ebbcc1f71fa06cf0108d52019e503580
152.5 kB Preview Download

Additional details

Related works

Is supplement to
Software: https://github.com/AstrobioMike/bit/tree/v1.9.1 (URL)