Published April 27, 2024 | Version 1.1
Dataset Open

Aligned DNA sequence matrix for phylogenetic analyses in the article "A new glassfrog of the genus Centrolene (Amphibia: Centrolenidae) from the Subandean Kutukú Cordillera, eastern Ecuador"

  • 1. Pontificia Universidad Católica del Ecuador

Description

Aligned DNA sequence matrix for phylogenetic analyses of the article "A new glassfrog of the genus Centrolene (Amphibia: Centrolenidae) from the Subandean Kutukú Cordillera, eastern Ecuador"

The matrix is in NEXUS format and has 6626 bp and 239 terminals.

Partitions are as follows:

charset 12S = 1-967;
charset 16S = 968-2130;
 
charset BNDFcodonPos1 =  2133-2829\3;
charset BNDFcodonPos2 =  2131-2830\3;
charset BNDFcodonPos3 =  2132-2828\3;
 
 
charset ND1codonPos1 =  2832-3786\3;
charset ND1codonPos2 =  2833-3787\3;
charset ND1codonPos3 =  2831-3788\3;
 
 
charset CXCR4codonPos1 =  3790-4144\3;
charset CXCR4codonPos2 =  3791-4142\3;
charset CXCR4codonPos3 =  3789-4143\3;
 
 
charset cmyccodonPos1 =  4145-4547\3;
charset cmyccodonPos2 =  4146-4548\3;
charset cmyccodonPos3 =  4147-4549\3;
 
 
charset POMCcodonPos1 =  4551-5160\3;
charset POMCcodonPos2 =  4552-5161\3;
charset POMCcodonPos3 =  4550-5162\3;
 
 
charset RAG1codonPos1 =  5163-5616\3;
charset RAG1codonPos2 =  5164-5617\3;
charset RAG1codonPos3 =  5165-5618\3;
 
 
charset SLC8A1codonPos1 =  5620-6160\3;
charset SLC8A1codonPos2 =  5621-6158\3;
charset SLC8A1codonPos3 =  5619-6159\3;
 
 
 
charset SLC8A3codonPos1 =  6162-6627\3;
charset SLC8A3codonPos2 =  6163-6625\3;
charset SLC8A3codonPos3 =  6161-6626\3;

 

Files

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md5:2f23d6ddc7e12608462ee7a21fb1d85c
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Additional details

Dates

Available
2024-04