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Published April 26, 2024 | Version 0.9e
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PombertLab/SYNY: SYNY-v0.9e

Authors/Creators

  • 1. Illinois Institute of Technology

Description

Cleanup release:

  • Fixed a bug that crashed nucleotide_biases.pl when the reference entered was not found. Now uses the first sequence alphabetically if the ref entered is not found.
  • Created fasta_to_gbff.pl to convert FASTA sequences to GBFF files (without annotations); useful to compare newly assembled genomes using pariwise alignments
  • Added Alignments, Clusters, Plots, and Utils subdirs to the git repository and moved scripts/data accordingly
  • Added shell scripts to download the example annotation data from NCBI
  • Improved/cleaned up README

Files

PombertLab/SYNY-0.9e.zip

Files (12.9 MB)

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Additional details

Related works

Is supplement to
Software: https://github.com/PombertLab/SYNY/tree/0.9e (URL)