Published April 26, 2024 | Version v1

pCLE Probe-Tissue Orientation (pCLE-PTO) dataset

Description

The pCLE data were collected using the Cellvizio system (Mauna Kea Technologies, Paris), by scanning lens paper and ex-vivo cow heart tissue. The samples were stained with 0.1% Acriflavin. The Smarpod microsurgical robot (SmarAct, Germany) was used to control the miniprobe. Smarpod robot rotation to collect pCLE data within a range of -10 degree to 10 degree relative to the normal of the object’s surface, taking steps of 0.5 degree. 

Our data collection yielded a total of 255 lens paper videos and 32 cow heart videos, each associated with specific probe-tissue orientations. We used 239 lens paper videos (9389 frames) for training, while 26 lens paper videos (1066 frames) and 32 cow heart videos (1312 frames) were allocated for testing. 

Files

heart_dataset.json

Files (2.1 GB)

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Additional details

Related works

Is published in
Dataset: 10.1007/s11548-024-03113-2 (DOI)

Software

Repository URL
https://github.com/CVRS-Hamlyn/FF-ViT
Programming language
Python