BGCFlow

What's Changed

New Features by @matinnuhamunada in https://github.com/NBChub/bgcflow/pull/339

• Upgrade antiSMASH to version 7.1.0 (42533e9)
• Upgrade BiG-SCAPE to version 1.1.9 (5cf8be8)
• Upgraded DuckDB and Metabase for enhanced database management and analytics (6bb8d07).
• Upgraded CheckM (dbe5c6c).
• Upgraded Seqfu2 (bf77b2b).
• Upgraded Clinker and Cblaster (d911b29, a1f6da0).
• Added a script to facilitate database uploads to Motherduck, improving the data integration process (29290e6).

Fixes

• Symlink Generation: Improved symlink generation for downstream biosynthetic gene cluster (BGC) preparation and sanitation processes (096a925).
• JSON Schema Compatibility: Addressed issues with incompatible JSON schema from older antiSMASH versions (d50f6a9).
• Project Example Update: Updated the example BGC project to be compatible with antiSMASH 7.1.0 (90b6d33).
• Input Handling: Enhanced handling of inputs when both input_file and gbk_path are specified in the configuration sample (a38fb1f).
• Empty Value Handling: Improved handling of empty values to prevent data errors (9750419).
• Log Path Correction: Corrected the log path for Patric downloads, ensuring accurate logging (ef70724).
• Clean strange character for Roary post-analysis by @JackSun1997 in https://github.com/NBChub/bgcflow/pull/327

New Contributors

• @JackSun1997 made their first contribution in https://github.com/NBChub/bgcflow/pull/327

Full Changelog: https://github.com/NBChub/bgcflow/compare/v0.8.3.2...v0.9.0