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Published April 12, 2024 | Version v2.5.12

RENEE: Rna sEquencing aNalysis pipElinE

  • 1. Advanced Biomedical Computational Science, Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA

Description

  • Minor documentation improvements. (#100, @kelly-sovacool)
  • Fix RNA report bug, caused by hard-coding of PC1-3, when only PC1-2 were generated. (#104, @slsevilla)
  • Allow printing the version or help message even if singularity is not in the path. (#110, @kelly-sovacool)
  • Fix RSeQC environments:
    • Set RSeQC envmodule version to 4.0.0, which synchronizes it with the version in the docker container used by singularity. (#122, @kelly-sovacool)
    • Update docker with RSeQC's tools properly added to the path. (#123, @kelly-sovacool)

Notes

Please cite RENEE as below.

Files

CCBR/RENEE-v2.5.12.zip

Files (4.2 MB)

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md5:39c589aa83a19eae0c380e4cefde013e
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Additional details

Related works

Is supplement to
Software: https://github.com/CCBR/RENEE/tree/v2.5.12 (URL)