mzmine/mzmine3: Latest Development Build

Commits

• 8354444: use desktop service (Steffen Heuckeroth) #1726
• 42aa8f0: move StatisticUtils to utils package (Steffen Heuckeroth) #1706
• c11ae35: add link (Steffen Heuckeroth) #1706
• c85d13d: Merge pull request #21 (Steffen Heuckeroth) #1706
• 26b7e28: Merge pull request #20 (Steffen Heuckeroth) #1706
• 61e1c4f: Merge pull request #19 (Steffen Heuckeroth) #1706
• 9847f89: Merge remote-tracking branch 'origin/statsdashboard' into statsdashboard (Steffen Heuckeroth) #1706
• f31fe5e: add scaling and imputation to gui, swap centering and scaling function order (Steffen Heuckeroth) #1706
• 31ef4c3: select loading from feature table use default marker strokes (Steffen Heuckeroth) #1706
• 4b8942b: put annotated rows on top in loadings (SteffenHeu) #1706
• 2211f51: review (Steffen Heuckeroth) #1706
• 4197e69: Merge remote-tracking branch 'origin/statsdashboard' into statsdashboard (Steffen Heuckeroth) #1706
• aec2efe: allow file name matching without extension (SteffenHeu) #1732
• e19a990: use >= <= in cell jumping, disable mean in boxplot (SteffenHeu) #1735
• 6a673b4: Merge remote-tracking branch 'mzmine/master' into statsdashboard (SteffenHeu) #1735
• bbcd618: Merge remote-tracking branch 'mzmine/master' into structure-in-table (Robin Schmid) #1727
• b37b962: add featuretablefx to double click action (Robin Schmid) #1727
• e55301a: double click structure open annotation tabs (Robin Schmid) #1727
• b510b8c: review, add check to tests (Robin Schmid) #1727
• 3954a0e: Fix nullable reference in ParentFeatureListPaneGroup (Robin Schmid) #1727
• 226da0f: review (Steffen Heuckeroth) #1728
• 9dd16a7: Merge pull request #1728 (Robin Schmid) #1728
• 09ecf6b: Merge remote-tracking branch 'mzmine/master' into user-management24 (Robin Schmid) #1742
• 2812821: move to utils (Robin Schmid) #1742
• 69f2567: add user button to menu (Robin Schmid) #1742
• 86721ae: improve pane factory (Robin Schmid) #1742
• ef58be7: user client (Robin Schmid) #1742
• cea54c1: fix user selection (Robin Schmid) #1742
• 4f5ef7e: update resolver preview from batch mode (SteffenHeu) #1739
• d7a87ea: public users online (Robin Schmid) #1742
• ff52d37: Merge pull request #1739 (Robin Schmid) #1739
• fa4a736: handle login and select last user on restart (Robin Schmid) #1742
• 8d85549: move deps (Robin Schmid) #1742
• a50237a: global events (Robin Schmid) #1742
• e30da6e: login task (Robin Schmid) #1742
• e407414: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 71867a7: add testrunner to actions (Robin Schmid)
• c1fea1c: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• a57891c: test runner user in GH actions (Robin Schmid) #1742
• 73633f0: global env (Robin Schmid)
• 618ed68: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 7881dcf: fail feature finding test with message if user is missing (Robin Schmid) #1742
• 9a910fe: pass env var into build (Robin Schmid)
• 2278b90: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 0d02a97: set env directly (Robin Schmid)
• 72026e9: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 693d8f6: fix env (Robin Schmid)
• fa2237b: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 4347cae: as file (Robin Schmid)
• 707b645: allow reading user from string (Robin Schmid) #1742
• cb124b5: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• e263b67: mkdir first (Robin Schmid)
• 7010eb5: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• d48061d: Try write env (Robin Schmid)
• ae30712: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 7e1be04: try direct value (Robin Schmid)
• 71209d8: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• e4c297d: more logging (Robin Schmid) #1742
• ee55a3e: set env (Robin Schmid)
• b6ccc48: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 1fd26c3: more logging (Robin Schmid) #1742
• 458c29a: environment (Robin Schmid)
• bf37ccf: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• ef8960a: more logs (Robin Schmid)
• 8e48c73: more logging (Robin Schmid) #1742
• 7301eab: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 3fa2fa5: inline var (Robin Schmid)
• 57e5d88: more logging (Robin Schmid) #1742
• ecc3869: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 6fb02b5: more logging (Robin Schmid) #1742
• 39ec2c3: more (Robin Schmid)
• 4763e2a: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 82ccb3f: try more (Robin Schmid)
• e15ab08: more logging (Robin Schmid) #1742
• 282e5ae: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• f239da0: base64 encode (Robin Schmid)
• 613a988: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 5dd926b: add more files (Robin Schmid) #1742
• b9d7164: in one command (Robin Schmid)
• 3b4620f: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• d523c44: move env (Robin Schmid)
• b193c24: more logging (Robin Schmid)
• 715e668: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 82889da: test action (Robin Schmid)
• 99ce67f: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• 626f0e7: add more files (Robin Schmid) #1742
• cb378e6: finalize github actions with env var (Robin Schmid) #1742
• 9f2f33b: try options (Robin Schmid) #1742
• 739181c: clean up (Robin Schmid) #1742
• e214ab9: change to target (Robin Schmid)
• dbe73ea: Merge remote-tracking branch 'mzmine/master' into user-management24-move-deps (Robin Schmid) #1742
• a9ea8fa: try logging (Robin Schmid) #1742
• 1e4a6c5: try logging (Robin Schmid) #1742
• db3c872: fix npe in volcano listener (Robin Schmid) #1743
• 5a0ef16: drag drop import wizard (Robin Schmid) #1746
• 359fe7b: change icons (SteffenHeu) #1749
• 4598886: create users menu (Robin Schmid) #1748
• 4c33f02: new user tab (Robin Schmid) #1748
• e46842f: create intro tab (SteffenHeu) #1749
• d2287ec: oopen yt (SteffenHeu) #1749
• a9c5b3e: auto update user webview while email verification is on (Robin Schmid) #1748
• fb87fb9: listen to light and dark mode changes (SteffenHeu) #1749
• 015b822: revert version (SteffenHeu) #1749
• 99574ce: use fx buttons (SteffenHeu) #1749
• d2097e6: use mzio color as accent (SteffenHeu) #1749
• 83a14c0: user menu update (Robin Schmid) #1748
• 1ef22bc: new user info tab and revisions (Robin Schmid) #1748
• 34f8bdf: change buttons to icon buttons (Robin Schmid) #1748
• a35c2f8: reorganise (SteffenHeu) #1749
• eba85cb: insert license check plugin (SteffenHeu) #1753
• 45e0a88: cleanup (SteffenHeu) #1749
• 11815dc: review1 (Robin Schmid) #1748
• 1cec460: Merge remote-tracking branch 'Robin/user-cleanup' into help_menu_cleanup (kyrasolaris01) #1755
• 5bb92a9: review css (Robin Schmid) #1748
• b506110: update licenses (SteffenHeu) #1753
• 1b7c8e3: remove eps export (SteffenHeu) #1753
• 636581d: exclude mzio package (SteffenHeu) #1753
• a5770e2: remove osermiller csv parser (SteffenHeu) #1753
• 5817a4d: remove weka library (SteffenHeu) #1753
• 70faec0: remove jmprojection-1.0.jar and gslibml-0.0.1.jar (SteffenHeu) #1753
• b4d9c39: remove clustering-20210422.jar, comment hierar aligner (SteffenHeu) #1753
• a3b680e: add cddl lincse as allowed license (SteffenHeu) #1753
• dd6931a: remove jmzml dependency (SteffenHeu) #1753
• 6393e18: remove aird dependency (SteffenHeu) #1753
• 9fa8bb4: Merge remote-tracking branch 'Steffen/landing_page' into help_menu_cleanup (kyrasolaris01) #1755
• 85397cd: add github action (SteffenHeu) #1753
• 1dd48e0: create license check action (SteffenHeu) #1753
• be0f213: test (SteffenHeu) #1753
• ac72bd5: add config (SteffenHeu) #1753
• 71a3da3: remove some logs (SteffenHeu) #1753
• a595af1: remove leftover code (SteffenHeu) #1753
• cebd688: Merge branch 'license-check-action' into license-check (SteffenHeu) #1753
• 452e3d0: About dialog to new about tab (kyrasolaris01) #1755
• e712380: Clean-up menu (kyrasolaris01) #1755
• d63c9e4: start dependency pane (SteffenHeu) #1753
• 71d502d: Merge remote-tracking branch 'mzmine/master' into landing_page (SteffenHeu) #1749
• 37ecb20: merge master (SteffenHeu) #1749
• a8a0a08: review (SteffenHeu) #1749
• caf8500: i have these libraries and no clue where they came from (SteffenHeu) #1753
• 3a40a9a: Merge remote-tracking branch 'mzmine/master' into license-check (SteffenHeu) #1753
• 1c98aeb: add list of all dependencies (SteffenHeu) #1753
• 4783b59: report an issue (kyrasolaris01) #1755
• 036a7dc: auto copy dependendy file to resources in build (SteffenHeu) #1753
• 2140731: delete dependency-licenses.json from resources (SteffenHeu) #1753
• 29e9a02: always use mzmine accent color for download button (SteffenHeu) #1749
• b3b37b4: remove subscription, use binding (SteffenHeu) #1749
• e198c8b: Merge pull request #1749 (Robin Schmid) #1749
• 584c67f: Merge remote-tracking branch 'mzmine/master' into help_menu_cleanup (SteffenHeu) #1755
• fee5115: merge master, code cleanup (SteffenHeu) #1755
• 081f05a: update yt link (SteffenHeu) #1755
• 9982eea: Merge remote-tracking branch 'mzmine/master' into license-check (SteffenHeu) #1753
• 058a9fc: revert changes in FxLayout (Robin Schmid) #1756
• b232923: Merge remote-tracking branch 'mzmine/master' into license-check (SteffenHeu) #1753
• 74bfcf7: workaround for changing tooltip colors (SteffenHeu) #1753
• aa48d93: update about tab (SteffenHeu) #1753
• 350799f: add junit license (SteffenHeu) #1762
• 6a0a9a5: start adap remove (SteffenHeu) #1762
• 2491639: fix TTestConfigurationParameter load (SteffenHeu)
• 5f59112: add junit license (SteffenHeu) #1753
• f88510c: update local libs (Robin Schmid) #1757
• e2eaf08: Merge pull request #1757 (Robin Schmid) #1757
• c5bb771: delete mzmine 2 user manual (kyrasolaris01) #1758
• b66336b: remove tracker (kyrasolaris01) #1760
• 21482ee: remove all adap dependencies, comment all modules (SteffenHeu) #1762
• 9d35b9c: add delay for version check (SteffenHeu) #1761
• e77edca: copy fix (SteffenHeu) #1762
• 4e54f06: copy fix (SteffenHeu) #1753
• 3fa3e61: Merge remote-tracking branch 'mzmine/master' into remove-adap (SteffenHeu) #1762
• 3061577: Merge remote-tracking branch 'mzmine/master' into license-check (SteffenHeu) #1753
• 34f891a: clean raw data and feature list menu (SteffenHeu) #1763
• c24f9b5: clean up visualisation menu (SteffenHeu) #1763
• cfc5445: Add new GC decon module (kyrasolaris01) #1764
• 47485fe: Add new GC decon module (kyrasolaris01) #1764
• 9dbdf0b: remove space (kyrasolaris01) #1764
• ca4661a: new feature list as result (kyrasolaris01) #1764
• f14e404: code for email domain handling (Robin Schmid) #1765
• b4ecacd: sort features first (kyrasolaris01) #1764
• 1376065: use range map to group features (Robin Schmid) #1764
• 6d23912: fix creation of new featurelist (Robin Schmid) #1764
• f277376: cleanup (Robin Schmid) #1764
• 908f26f: use main feature (Robin Schmid) #1764
• d0a5a1c: Merge remote-tracking branch 'mzmine/master' into fork/remove-adap (Robin Schmid) #1762
• ea6bf3f: Merge remote-tracking branch 'mzmine/master' into fork/mainmenucleanup (Robin Schmid) #1763
• f3d3137: exclude removed modules (Robin Schmid) #1763
• 8d5ca5e: replace html message by textflow (SteffenHeu) #1766
• bead289: fix main menu (SteffenHeu) #1763
• 95b051a: double range fix (SteffenHeu) #1763
• b1f9aa7: update label in ListDoubleRangeComponent (SteffenHeu) #1763
• 2a1c528: activate GC-EI wizard (kyrasolaris01) #1767
• 5c64fba: refresh local libs (Robin Schmid) #1768
• 9ebd601: update citation style (SteffenHeu) #1766
• b2a67be: update accordion theme style (SteffenHeu) #1766
• e4d02a6: revert build gradle (SteffenHeu) #1766
• a739bb3: Merge remote-tracking branch 'mzmine/master' into parameterpanemessage (SteffenHeu) #1766
• ff69b21: rename MZmine to mzmine in build script (SteffenHeu) #1770
• 439b0c4: revisions (Robin Schmid) #1766
• 04ac752: rename adap chrom builder (SteffenHeu)
• 41b37b3: set min size for stats dashboard (SteffenHeu) #1769
• c88a3d2: fix webview creation on javafx thread (Robin Schmid) #1768
• 74355b4: Merge remote-tracking branch 'refs/remotes/origin/master' into GC-wizard-update (kyrasolaris01) #1767
• b811d67: allow users with . in name (Robin Schmid) #1768
• 26f1626: remove parameter (kyrasolaris01) #1767
• daf4f8e: keep selection on current user (Robin Schmid) #1768
• 8b730d5: remove license check result copy from build (SteffenHeu) #1771
• 9e5406c: Merge remote-tracking branch 'mzmine/master' into rename-mzmine-in-buildscript (SteffenHeu) #1770
• f5e2233: mzconfig into .mzmine user folder (Robin Schmid) #1772
• fef0b05: Merge remote-tracking branch 'refs/remotes/origin/master' into GC-wizard-update (kyrasolaris01) #1767
• fc7e44b: config load save (Robin Schmid) #1772
• 6c72716: remove remove-xmlgrahpics (SteffenHeu) #1773
• d7ce6a8: batch new format (Robin Schmid) #1774
• 0839426: Merge remote-tracking branch 'mzmine/master' into rename-mzmine-in-buildscript (SteffenHeu) #1770
• 67fe3d1: Merge remote-tracking branch 'refs/remotes/origin/master' into GC-wizard-update (kyrasolaris01) #1767
• b3154ba: enable auto license update (Steffen Heuckeroth) #1770
• d1a6cc3: Merge branch 'master' into config-file-name (Robin Schmid) #1772
• 910262a: remove error email preference (Robin Schmid) #1776
• d217ea2: update mzmine jar name in macos signing (SteffenHeu) #1778
• fe1a48a: update-libname (SteffenHeu) #1779