Published April 8, 2024 | Version v1

De novo nine-species benchmark

  • 1. ROR icon University of Antwerp

Description

A new version of the nine-species benchmark originally described by Tran et al. [Tran2017] and revisited by Yilmaz et al. [Yilmaz2023].

[Tran2017] Tran, N. H., Zhang, X., Xin, L., Shan, B. & Li, M. De novo peptide sequencing by deep learning. Proceedings of the National Academy of Sciences of the United States of America 31, 8247-8252 (2017). [doi:10.25345/C52V2CK8J]
[Yilmaz2023] Yilmaz, M., Fondrie, W. E., Bittremieux, W., Nelson, R., Ananth, V., Oh, S., & Noble, W. S. (2023). Sequence-to-sequence translation from mass spectra to peptides with a transformer model.

Files

Apis-mellifera.zip

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