Published April 1, 2024 | Version 3.3.0
Software Open

nf-core/airrflow: 3.3.0 - 2024-03-31 Confringo

Creators

  • 1. Boehringer Ingelheim
  • 2. oNKo-innate
  • 3. QBiC
  • 4. @seqeralabs
  • 5. Seqera
  • 6. Tgen
  • 7. Robert Bosch GmbH

Description

Added

  • #294 Merge template updates nf-core/tools v2.11.1
  • #299 Add profile for common NEB and TAKARA protocols
  • #289 Add possibility to merge multi-lane samples when starting from fastq files
  • #289 Add possibility to run cellranger for scVDJseq data

Fixed

  • #294 Removed optional output from FilterQuality to not fail silently
  • #293 Clonal_threshold is validated to be 'auto' or number greater than zero
  • #295 Fixed airrflow report sequence plot and add path to clonal analysis reports
  • #310 Bump versions to 3.3.0, update containers and software versions

Dependencies

| Dependency | Old version | New version | | ---------- | ----------- | ----------- | | multiqc | 1.19 | 1.21 | | enchantr | 0.1.9 | 0.1.11 | | igblast | 1.19.0 | 1.22.0 |

Files

nf-core/airrflow-3.3.0.zip

Files (2.5 MB)

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md5:1b8d39da1c1aee42ebe86833ab84df0e
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Additional details

Related works

Is supplement to
Software: https://github.com/nf-core/airrflow/tree/3.3.0 (URL)