Published October 17, 2024
| Version v1.0.0
Dataset
Open
NanoBaseLib: A Multi-Task Benchmark Dataset for Nanopore Sequencing
Creators
Description
NanoBaseLib is a multi-task benchmark dataset for Nanopore Sequencing. We compile and preprocess publicly available datasets using a unified pipeline to ensure consistency and quality across all tasks. The dataset is benchmarked for four key Nanopore sequencing tasks: base calling, polyA detection, segmentation and event alignment, and RNA modification detection. NanoBaseLib is available at https://nanobaselib.github.io.
Files
Files
(190.2 GB)
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md5:660cddccbfb18f1049abc809b4f77b81
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3.6 GB | Download |
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md5:c94aeb03bba9ba5a89ea9ec278b9b82d
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319.1 MB | Download |
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md5:6d812f2f3d9f658face55442b4a5d089
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1.1 GB | Download |
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md5:4627b533cd5588a70742ede1cd473ef4
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6.6 GB | Download |
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md5:f36b2d9085c0412d557226fd4935fa3b
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357.9 MB | Download |
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md5:af992500d7f1c3a1999e2414a1f7e414
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1.4 GB | Download |
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md5:9ee3d3b5874aacb801560f35be387f5a
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6.0 GB | Download |
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md5:b95e15df2d4ce9a3b59811abc93fbefb
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307.7 MB | Download |
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md5:726940efc0b436b3b0666aae89e8abce
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81.9 GB | Download |
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md5:70b89dda71debe0c8bfbf2e91b4d0b99
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394.3 MB | Download |
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md5:aae1f776197feaa0af032f27d5ed20ca
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228.5 MB | Download |
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md5:1dd4703896d42f84144bf9a5a9e82b48
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376.4 MB | Download |
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md5:40ab24640cf67ea11f9b7461c1b7b371
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70.6 GB | Download |
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md5:64aec2f6be456d37510bbed7f20da9ea
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2.9 GB | Download |
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md5:8ab01747d30490dc1e9a318fa6b659c6
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110.5 MB | Download |
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md5:9189dbc0ee8871250f1a4cbd604c704a
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5.0 GB | Download |
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md5:c0faaf7e9dc18abbed857988dd598a74
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8.8 GB | Download |
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md5:d62844cb5ce0583ce5376612397200c4
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157.7 MB | Download |
Additional details
Software
- Repository URL
- https://github.com/nanobaselib/NanoBaseLib