Published March 13, 2024
| Version v1.7.1
Software
Open
gbouras13/pharokka: v1.7.1
Authors/Creators
- 1. Universidad de los Andes
- 2. EMBL / LUMC, @zellerlab
- 3. Sunagawa Lab @ ETH Zürich
- 4. @pyupio
Description
- Adds Google Colab notebook that can run pharokka and phold.
- The notebook is https://colab.research.google.com/github/gbouras13/pharokka/blob/master/run_pharokka_and_phold.ipynb
- Fixes #334 issue with contig ids if they were in scientific notation or lead with 0s.
- Fixes issues with
pharokka_proteins.pynot outputting PHROG annotations.
Files
gbouras13/pharokka-v1.7.1.zip
Files
(15.8 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:6abf35ff752f2541e3c948017f0544d4
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Additional details
Related works
- Is supplement to
- Software: https://github.com/gbouras13/pharokka/tree/v1.7.1 (URL)