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Published March 8, 2024 | Version 7.5.0.108
Software Open

virtualcell/vcell: Make CLI reports match BioSimUtils style reports

Authors/Creators

  • 1. UConn Health @virtualcell
  • 2. @TheClimateCorporation
  • 3. Formic Labs
  • 4. Eliceiri/LOCI lab, UW-Madison
  • 5. @formiclabs
  • 6. UConn Health
  • 7. Gitter

Description

Repeated tasks in SED-ML can potentially apply to multiple "SubTask"s; VCell can not currently do that, but it can do Parameters scans (Repeated Tasks with only 1 sub task). However, BioSimulators Utils wraps simulators in such a way that it dedicates output dimensions to subtasks; VCell CLI has been upgraded to simulate the same thing, even though it moot for VCell's abilities.

Files

virtualcell/vcell-7.5.0.108.zip

Files (79.9 MB)

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md5:9e00e16aa78701544e08d8d74f718e04
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Additional details

Related works

Is supplement to
Software: https://github.com/virtualcell/vcell/tree/7.5.0.108 (URL)