Processed data for the paper 'A blueprint for tumor-infiltrating B cells across human cancers'

scRNA data

panB_scRNA_processed_data.rds: contains integrated datasets for 474,718 B cells, which can be processed into the R environment with Seurat directly. Annotations such as type, cancer, patient, celltype and dataid are provieded.

panB_Plasma_cell_selected_scRNA_processed_data.rds: contains integrated datasets for 69,122 plasma cells, which can be processed into the R environment with Seurat directly. Annotations such as type, cancer, patient, celltype and dataid are provieded.

BCR data

panB_BCR_processed_data.rds: contains paired sc-BCR seq and sc-RNA seq data for 166,733 B cells, which can be processed into the R environment with Seurat directly. Annotations such as type, cancer, patient, celltype, dataid, cdr3, clone_id and SHM are provieded.