Published February 12, 2024
| Version v1
Dataset
Open
PPIRef
Authors/Creators
Description
PPIRef is a dataset of 3D structures of protein-protein interfaces. See the GitHub repository for more details.
ppi_6A.zip stores the PPIRef dataset: .pdb files with all 6A-distance interfaces from PDB as of Jan 2024.
ppi_6A_stats.zip stores the statistics about the dataset. This includes the indexes for fast search with MMseqs2 and iDist, as well as a .csv file with some statistics for all interfaces.
Files
ppi_6A_stats.zip
Files
(9.7 GB)
| Name | Size | Download all |
|---|---|---|
|
md5:e616d01be7998a3ac7b0a66917686784
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6.6 GB | Preview Download |
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md5:4152f220384ded2f1a67989c39ea77ef
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3.1 GB | Preview Download |
Additional details
Related works
- Is published in
- Dataset: arXiv:2310.18515 (arXiv)
Software
- Repository URL
- https://github.com/anton-bushuiev/PPIRef
- Programming language
- Python