There is a newer version of the record available.

Published January 23, 2024 | Version V15

UCSCXenaShiny Extra Data Repository

Authors/Creators

  • 1. ShanghaiTech University

Description

This is the extra data repository for UCSCXenaShiny project. All datasets are obtained either from the public database UCSC Xena/GDC portal, or publications. The datasets are cleaned and stored in RData format and most data source can be obtained by `attr(obj, "data_source)"` in R.

If you use the data in your academic project, please cite regarding data source and our project paper:

Wang, S.; Xiong, Y.; Gu, K.; Zhao, L.; Li, Y.; Zhao, F.; Li, X.; Liu, X. UCSCXenaShiny: An R Package for Exploring and Analyzing UCSC Xena Public Datasets in Web Browser. Preprints 2020, 2020070179 (doi: 10.20944/preprints202007.0179.v1).

Notes

update OP data from Yuzhong

Files

Files (643.9 MB)

Name Size
md5:8bbbd0e045c2cb1f16b12a3ed921a377
423.0 kB Download
md5:66f551d0070f9d5c0b0951c1cba7b1fc
110.0 MB Download
md5:63fd7bf51a124a44f6f8b2ed6454cd6f
1.2 MB Download
md5:16ac9c97100f38eef89d36a78f1e84df
144.3 kB Download
md5:b0a9aa02be19ad49f178ad62dec82a2c
113.8 MB Download
md5:346e6c66083d0493b5a4edd93891db45
8.6 MB Download
md5:feb2ec78e883a25cd166a2ada5c48cf0
14.5 MB Download
md5:d529c44e8030ee7a2a120fbb56c3f78c
230.0 MB Download
md5:95a482156ec87f93c326736be00b67c9
268.5 kB Download
md5:3fadb55c94c44200e9aff51aab708e2f
52.6 MB Download
md5:ebff56b1c0f31c5ac2a72908d62b59f4
9.1 MB Download
md5:68e2eedbbb8b86f90a007ea696f1fa78
14.1 MB Download
md5:4d3c3a141fb705df526b8b858ac47382
1.2 MB Download
md5:86cf3ebf0eb029abed4ef7ae2e63fdcb
108.0 kB Download
md5:9fed78137a26bba991b3bb1ac06b8445
12.4 MB Download
md5:b052b275846189e391248b0f79d8519a
52.7 kB Download
md5:b9beae902e1d4ee4d57ffd300c82f4e4
8.1 MB Download
md5:59ec8e5b277f727c888aa6f0d752c9be
1.7 MB Download
md5:ed0863ef5fc1c63b6d821f6b22ec290a
478.4 kB Download
md5:78ade85391ea4c7ce097c0080b477027
5.5 MB Download
md5:7d0f5378e934dc071f950948757ed116
1.0 MB Download
md5:08dc07c10504156f10ea8b0ee6d87999
192.4 kB Download
md5:d40520fba14d27b913c4d34bb6309b09
577.9 kB Download
md5:e2414afe3a9d840f14431a2ffc732cd2
1.6 MB Download
md5:ffb7304a57b181ac747af5ada565fc02
168.2 kB Download
md5:df150823fb850263a464602e082369de
8.1 MB Download
md5:aa0838c02aff904d540b95dea26dd042
38.9 MB Download
md5:e9afb749d495f80a7b85368f4474cff1
76.8 kB Download
md5:c0164ac926bc15948d8fb0ff7b631064
499.7 kB Download
md5:90ba24562cd18bcca502404e277e73c8
7.8 MB Download
md5:a435b89de392a1371c3bd102d1890ecf
208.9 kB Download
md5:29fb9ccc84011de7632740ddca19f705
534.8 kB Download