Biodiversity Literature Repository

Submit to community
Liberated Data
Published April 30, 2015 | Version v1
Journal article Restricted

Pinoresinol reductase 1 impacts lignin distribution during secondary cell wall biosynthesis in Arabidopsis

Authors/Creators

  • 1. Plant Biology Division, Samuel Roberts Noble Foundation, 2510 Sam Noble Parkway, Ardmore, OK 73401, USA

Description

Zhao, Qiao, Zeng, Yining, Yin, Yanbin, Pu, Yunqiao, Jackson, Lisa A., Engle, Nancy L., Martin, Madhavi Z., Tschaplinski, Timothy J., Ding, Shi-You, Ragauskas, Arthur J., Dixon, Richard A. (2015): Pinoresinol reductase 1 impacts lignin distribution during secondary cell wall biosynthesis in Arabidopsis. Phytochemistry 112 (1): 170-178, DOI: 10.1016/j.phytochem.2014.07.008, URL: http://dx.doi.org/10.1016/j.phytochem.2014.07.008

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.

Linked records

Additional details

Identifiers

LSID
urn:lsid:plazi.org:pub:0E37FFD0FFCB3F0BA14CF74E6C72FFEC

Related works

Has part
Figure: 10.5281/zenodo.10487489 (DOI)
Figure: 10.5281/zenodo.10487491 (DOI)
Figure: 10.5281/zenodo.10487493 (DOI)
Figure: 10.5281/zenodo.10487495 (DOI)
Figure: 10.5281/zenodo.10487497 (DOI)

References

  • Attoumbre, J., Bienaime, C., Dubois, F., Fliniaux, M.A., Chabbert, B., Baltora-Rosset, S., 2010. Development of antibodies against secoisolariciresinol - application to the immunolocalization of lignans in Linum usitatissimum seeds. Phytochemistry 71, 1979-1987.
  • Berthet, S., Demont-Caulet, N., Pollet, B., Bidzinski, P., Cezard, L., Le Bris, P., Borrega, N., Herve, J., Blondet, E., Balzergue, S., Lapierre, C., Jouanin, L., 2011. Disruption of LACCASE4 and 17 results in tissue-specific alterations to lignification of Arabidopsis thaliana stems. Plant Cell 23, 1124-1137.
  • Binns, A.N., Chen, R.H., Wood, H.N., Lynn, D.G., 1987. Cell division promoting activity of naturally occurring dehydrodiconiferyl glucosides: do cell wall components control cell division? Proc. Natl. Acad. Sci. U.S.A. 84, 980-984.
  • Bonawitz, N.D., Chapple, C., 2010. The genetics of lignin biosynthesis: connecting genotype to phenotype. Annu. Rev. Genet. 44, 337-363.
  • Chang, H.-M., Cowling, E.B., Brown, W., Adler, E., Miksche, G., 1975. Comparative studies on cellulolytic enzyme lignin and milled wood lignin of sweetgum and spruce. Holzforschung 29, 153-159.
  • Davin, L.B., Wang, H.B., Crowell, A.L., Bedgar, D.L., Martin, D.M., Sarkanen, S., Lewis, N.G., 1997. Stereoselective bimolecular phenoxy radical coupling by an auxiliary (dirigent) protein without an active center. Science 275, 362-366.
  • Davis, J., Brandizzi, F., Liepman, A.H., Keegstra, K., 2010. Arabidopsis mannan synthase CSLA9 and glucan synthase CSLC4 have opposite orientations in the Golgi membrane. Plant J. 64, 1028-1037.
  • Ding, S.Y., Liu, Y.S., Zeng, Y.N., Himmel, M.E., Baker, J.O., Bayer, E.A., 2012. How does plant cell wall nanoscale architecture correlate with enzymatic digestibility? Science 338, 1055-1060.
  • Dixon, R.A., 2004. Phytoestrogens. Annu. Rev. Plant Biol. 55, 225-261.
  • Dozmorov, I., Centola, M., 2003. An associative analysis of gene expression array data. Bioinformatics 19, 204-211.
  • Hano, C., Martin, I., Fliniaux, O., Legrand, B., Gutierrez, L., Arroo, R.R., Mesnard, F., Lamblin, F., Laine, E., 2006. Pinoresinol-lariciresinol reductase gene expression and secoisolariciresinol diglucoside accumulation in developing flax (Linum usitatissimum) seeds. Planta 224, 1291-1301.
  • Hemmati, S., von Heimendahl, C.B., Klaes, M., Alfermann, A.W., Schmidt, T.J., Fuss, E., 2010. Pinoresinol-lariciresinol reductases with opposite enantiospecificity determine the enantiomeric composition of lignans in the different organs of Linum usitatissimum L. Planta Med. 76, 928-934.
  • Holtman, K.M., Chang, H.-M., Kadla, J.F., 2004. Solution-state nuclear magnetic resonance study of the similarities between milled wood lignin and cellulolytic enzyme lignin. J. Agric. Food Chem. 52, 720-726.
  • Huis, R., Morreel, K., Fliniaux, O., Lucau-Danila, A., Fenart, S., Grec, S., Neutelings, G., Chabbert, B., Mesnard, F., Boerjan, W., Hawkins, S., 2012. Natural hypolignification is associated with extensive oligolignol accumulation in flax stems. Plant Physiol. 158, 1893-1915.
  • Lee, Y., Rubio, M.C., Alassimone, J., Geldner, N., 2013. A mechanism for localized lignin deposition in the endodermis. Cell 153, 402-412.
  • Leek, J.T., Monsen, E., Dabney, A.R., Storey, J.D., 2006. EDGE: extraction and analysis of differential gene expression. Bioinformatics 22, 507-508.
  • Li, C., Wong, W.H., 2001. Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection. Proc. Natl. Acad. Sci. U.S.A. 98, 31-36.
  • Li, Y., Tschaplinski, T.J., Engle, N.L., Hamilton, C.Y., Rodriguez Jr., M., Liao, J.C., Schadt, C.W., Guss, A.M., Yang, Y., Graham, D.E., 2012. Combined inactivation of the Clostridium cellulolyticum lactate and malate dehydrogenase genes substantially increases ethanol yield from cellulose and switchgrass fermentations. Biotechnol. Biofuels 5, 2.
  • McCann, M.J., Gill, C.I., McGlynn, H., Rowland, I.R., 2005. Role of mammalian lignans in the prevention and treatment of prostate cancer. Nutr. Cancer 52, 1-14.
  • Moinuddin, S.G.A., Jourdes, M., Laskar, D.D., Ki, C., Cardenas, C.L., Kim, K.W., Zhang, D., Davin, L.B., Lewis, N.G., 2010. Insights into lignin primary structure and deconstruction from Arabidopsis thaliana COMT (caffeic acid O-methyl transferase) mutant Atomt1. Org. Biomol. Chem. 8, 3928-3946.
  • Nakashima, J., Chen, F., Jackson, L., Shadle, G., Dixon, R.A., 2008. Multi-site genetic modification of monolignol biosynthesis in alfalfa (Medicago sativa L.) - effects on lignin composition in specific cell types. New Phytol. 179, 738-750.
  • Nakatsubo, T., Mizutani, M., Suzuki, S., Hattori, T., Umezawa, T., 2008. Characterization of Arabidopsis thaliana pinoresinol reductase, a new type of enzyme involved in lignan biosynthesis. J. Biol. Chem. 283, 15550-15557.
  • Naoumkina, M.A., Zhao, Q., Gallego-Giraldo, L., Dai, X., Zhao, P.X., Dixon, R.A., 2010. Genome-wide analysis of phenylpropanoid defence pathways. Mol. Plant Pathol. 11, 829-846.
  • Pu, Y., Chen, F., Ziebell, A., Davison, B.H., Ragauskas, A.J., 2009. NMR characterization of C3H and HCT down-regulated alfalfa lignin. Bioenergy Res. 2, 198-208.
  • Roberts, A.W., Roberts, E.M., Haigler, C.H., 2012. Moss cell walls: structure and biosynthesis. Front. Plant Sci. 3, 166.
  • Ruprecht, C., Mutwil, M., Saxe, F., Eder, M., Nikoloski, Z., Persson, S., 2011. Largescale co- expression approach to dissect secondary cell wall formation across plant species. Front. Plant Sci. 2, 23.
  • Scher, J.M., Zapp, J., Becker, H., 2003. Lignan derivatives from the liverwort Bazzania trilobata. Phytochemistry 62, 769-777.
  • Schmidt, T.J., Hemmati, S., Klaes, M., Konuklugil, B., Mohagheghzadeh, A., Ionkova, I., Fuss, E., Wilhelm Alfermann, A., 2010. Lignans in flowering aerial parts of Linum species - chemodiversity in the light of systematics and phylogeny. Phytochemistry 71, 1714-1728.
  • Tschaplinski, T.J., Standaert, R.F., Engle, N.L., Martin, M.Z., Sangha, A.K., Parks, J.M., Smith, J.C., Samuel, R., Pu, Y., Ragauskas, A.J., Hamilton, C.Y., Fu, C., Wang, Z.-Y., Davison, B.H., Dixon, R.A., Meilenz, J.R., 2013. Down-regulation of the caffeic acid O -methyltransferase gene in switchgrass reveals a novel monolignol analog. Biotechnol. Biofuels 5, 71.
  • Umezawa, T., 2003. Diversity in lignan biosynthesis. Phytochem. Rev. 2, 371-390.
  • Villalobos, D.P., Diaz-Moreno, S.M., Said el, S.S., Canas, R.A., Osuna, D., Van Kerckhoven, S.S., Bautista, R., Claros, M.G., Canovas, F.M., Canton, F.R., 2012. Reprogramming of gene expression during compression wood formation in pine: coordinated modulation of S-adenosylmethionine, lignin and lignan related genes. BMC Plant Biol. 12, 100.
  • von Heimendahl, C.B., Schafer, K.M., Eklund, P., Sjoholm, R., Schmidt, T.J., Fuss, E., 2005. Pinoresinol-lariciresinol reductases with different stereospecificity from Linum album and Linum usitatissimum. Phytochemistry 66, 1254-1263.
  • Wang, S., Yin, Y., Ma, Q., Tang, X., Hao, D., Xu, Y., 2012. Genome-scale identification of cell-wall related genes in Arabidopsis based on co-expression network analysis. BMC Plant Biol. 12, 1-12.
  • Weng, J.K., Chapple, C., 2010. The origin and evolution of lignin biosynthesis. New Phytol. 187, 273-285.
  • Zhao, Q., Dixon, R.A., 2011. Transcriptional networks for lignin biosynthesis: more complex than we thought? Trends Plant Sci. 16, 227-233.
  • Zhao, Q., Gallego-Giraldo, L., Wang, H., Zeng, Y., Ding, S.Y., Chen, F., Dixon, R.A., 2010a. An NAC transcription factor orchestrates multiple features of cell wall development in Medicago truncatula. Plant J. 63, 100-114.
  • Zhao, Q., Nakashima, J., Chen, F., Yin, Y., Fu, C., Yun, J., Shao, H., Wang, X., Wang, Z.Y., Dixon, R.A., 2013a. LACCASE is necessary and nonredundant with PEROXIDASE for lignin polymerization during vascular development in Arabidopsis. Plant Cell 25, 3976-3987.
  • Zhao, Q., Tobimatsu, Y., Zhou, R., Pattathil, S., Gallego-Giraldo, L., Fu, C., Jackson, L.A., Hahn, M.G., Kim, H., Chen, F., Ralph, J., Dixon, R.A., 2013b. Loss of function of cinnamyl alcohol dehydrogenase 1 leads to unconventional lignin and a temperature-sensitive growth defect in Medicago truncatula. Proc. Natl. Acad. Sci. U.S.A. 110, 13660-13665.
  • Zhao, Q., Wang, H., Yin, Y., Xu, Y., Chen, F., Dixon, R.A., 2010b. Syringyl lignin biosynthesis is directly regulated by a secondary cell wall master switch. Proc. Natl. Acad. Sci. U.S.A. 107, 14496-14501.
  • Zhong, R., Demura, T., Ye, Z.H., 2006. SND1, a NAC domain transcription factor, is a key regulator of secondary wall synthesis in fibers of Arabidopsis. Plant Cell 18, 3158-3170.
  • Zhong, R., Richardson, E.A., Ye, Z.H., 2007. The MYB46 transcription factor is a direct target of SND1 and regulates secondary wall biosynthesis in Arabidopsis. Plant Cell 19, 2776-2792.