Published May 31, 2016
| Version v1
Journal article
Restricted
Variability in the carbon isotope composition of individual amino acids in plant proteins from different sources: 1 Leaves
Authors/Creators
- 1. Laboratory for Archaeology and the History of Art, South Parks Road, University of Oxford, Oxford OX1 3QY, UK & Department of Chemistry, Mansfield Road, University of Oxford, Oxford OX1 3TA, UK
Description
Lynch, Anthony H., Kruger, Nicholas J., Hedges, Robert E.M., McCullagh, James S.O. (2016): Variability in the carbon isotope composition of individual amino acids in plant proteins from different sources: 1 Leaves. Phytochemistry 125: 27-34, DOI: 10.1016/j.phytochem.2016.01.011, URL: http://dx.doi.org/10.1016/j.phytochem.2016.01.011
Files
Linked records
Additional details
Identifiers
- LSID
- urn:lsid:plazi.org:pub:326DFFFBB14A7F10A7379269F218EE13
- URL
- http://publication.plazi.org/id/326DFFFBB14A7F10A7379269F218EE13
Related works
- Has part
- Taxonomic treatment: http://treatment.plazi.org/id/CE548783B14B7F15A412904FF651EF0E (URL)
- Figure: 10.5281/zenodo.10484965 (DOI)
- Figure: 10.5281/zenodo.10484967 (DOI)
References
- Abelson, P.H., Hoering, T.C., 1961. Carbon isotope fractionation in formation of amino acids by photosynthetic organisms. Proc. Natl. Acad. Sci. U.S.A. 47, 623- 632.
- Bacci, L., Baronti, S., Predieri, S., di Virgilio, N., 2009. Fiber yield and quality of fiber nettle (Urtica dioica L.) cultivated in Italy. Ind. Crops Prod. 29, 480-484.
- Barnes, R.L., 1963. Organic nitrogen compounds in tree xylem sap. For. Sci. 9, 98- 102.
- Benner, R., Fogel, M.L., Sprague, E.K., Hodson, R.E., 1987. Depletion of 13C in lignin and its implications for stable carbon isotope studies. Nature 329, 708-710.
- Bertani, A., Brambilla, I., Mapelli, S., 2006. Nitrogen storage and translocation in walnut plant: free amino acids. Acta Horticult. 705, 261-267.
- Bloch, D., Hoffmann, C.M., Marlander, B., 2006. Impact of water supply on photosynthesis, water use and carbon isotope discrimination of sugar beet genotypes. Eur. J. Agron. 24, 218-225.
- Chikaraishi, Y., Naraoka, H., Poulson, S.R., 2004. Hydrogen and carbon isotope fractionations of lipid biosynthesis among terrestrial (C3, C4 and CAM) and aquatic plants. Phytochemistry 65, 1369-1381.
- Deniro, M.J., Epstein, S., 1977. Mechanism of carbon isotope fractionation associated with lipid synthesis. Science 197, 261-263.
- Dungait, J.A.J., Doherty, G., Straker, V., Evershed, R.P., 2008. Interspecific variation in bulk tissue, fatty acid and monosaccharide δ13C values of leaves from a mesotrophic grassland plant community. Phytochemistry 69, 2041-2051.
- Dunn, P.J.H., Honch, N.V., Evershed, R.P., 2011. Comparison of liquid chromatography-isotope ratio mass spectrometry (LC/IRMS) and gas chromatography-combustion-isotope ratio mass spectrometry (GC/C/IRMS) for the determination of collagen amino acid δ13C values for palaeodietary and palaeoecological reconstruction. Rapid Commun. Mass Spectrom. 25, 2995- 3011.
- Farquhar, G.D., O'Leary, M.H., Berry, J.A., 1982. On the relationship between carbon isotope discrimination and the intercellular carbon dioxide concentration in leaves. Aust. J. Plant Physiol. 9, 121-137.
- Farquhar, G.D., Ehleringer, J.R., Hubick, K.T., 1989. Carbon isotope discrimination and photosynthesis. Annu. Rev. Plant Physiol. Plant Mol. Biol. 40, 503-537.
- Fogel, M.L., Tuross, N., 2003. Extending the limits of paleodietary studies of humans with compound specific carbon isotope analysis of amino acids. J. Archaeol. Sci. 30, 535-545.
- Gannes, L.Z., del Rio, C.M., Koch, P., 1998. Natural abundance variations in stable isotopes and their potential uses in animal physiological ecology. Comp. Biochem. Physiol. Part A: Mol. Integr. Physiol. 119, 725-737.
- Gilbert, A., Silvestre, V., Robins, R.J., Remaud, G.S., Tcherkez, G., 2012. Biochemical and physiological determinants of intramolecular isotope patterns in sucrose from C3, C4 and CAM plants accessed by isotopic 13C NMR spectrometry: a viewpoint. Nat. Prod. Rep. 29, 476-486.
- Graham, L.E., 1993. Origin of Land Plants. Wiley, New York.
- Hayes, J.M., 2001. Fractionation of carbon and hydrogen isotopes in biosynthetic processes. Rev. Mineral. Geochem. 43, 191-277.
- Higuchi, T., Ito, Y., Kawamura, I., 1967. P-Hydroxyphenylpropane component of grass lignin and role of tyrosine-ammonia lyase in its formation. Phytochemistry 6, 875-881.
- Jim, S., Jones, V., Ambrose, S.H., Evershed, R.P., 2006. Quantifying dietary macronutrient sources of carbon for bone collagen biosynthesis using natural abundance stable carbon isotope analysis. Br. J. Nutr. 95, 1055-1062.
- Joshi, V., Laubengayer, K.M., Schauer, N., Fernie, A.R., Jander, G., 2006. Two Arabidopsis threonine aldolases are nonredundant and compete with threonine deaminase for a common substrate pool. Plant Cell 18, 3565-3575.
- Kubiak-Martens, L., 1999. The plant food component of the diet at the late Mesolithic (Ertebolle) settlement at Tybrind Vig, Denmark.Veg.Hist. Archaeobot.8, 117-127.
- Larsen, T., Taylor, D.L., Leigh, M.B., O'Brien, D.M., 2009. Stable isotope fingerprinting: a novel method for identifying plant, fungal, or bacterial origins of amino acids. Ecology 90, 3526-3535.
- Larsen, T., Ventura, M., Andersen, N., O'Brien, D.M., Piatkowski, U., McCarthy, M.D., 2013. Tracing carbon sources through aquatic and terrestrial food webs using amino acid stable isotope fingerprinting. PLoS ONE 8, e73441.
- Larsen, T., Bach, L.T., Salvatecci, R., Wang, Y.V., Anderson, N., Ventura, M., McCarthy, M.D., 2015. Assessing the potential of amino acid 13C patterns as a carbon source tracer in marine sediments: effects of algal growth conditions and sedimentary diagnosis. Biogeosciences 12, 4979-4992.
- Lynch, A.H., McCullagh, J.S.O., Hedges, R.E.M., 2011. Liquid chromatography-isotope ratio mass spectrometry measurement of δ13C of amino acids in plant proteins. Rapid Commun. Mass Spectrom. 25, 2981-2988.
- McCullagh, J.S.O., Hedges, R.E.M., Juchelka, D., 2006. Analysis of amino acids 13C abundance from human and faunal bone collagen using liquid chromatography/ isotope ratio mass spectrometry. Rapid Commun. Mass Spectrom. 20, 2761-2768.
- Melzer, E., O'Leary, M.H., 1987. Anapleurotic CO2 fixation by phosphoenol-pyruvate carboxylase in C3 plants. Plant Physiol. 84, 58-60.
- Melzer, E., Schmidt, H.-L., 1987. Carbon isotope effects on the pyruvate dehydrogenase reaction and their importance for relative carbon-13 depletion in lipids. J. Biol. Chem. 262, 8159-8164.
- Millard, P., Wendler, R., Hepburn, A., Smith, A., 1998. Variations in the amino acid composition of xylem sap of Betula pendula Roth. trees due to remobilization of stored N in the spring. Plant Cell Environ. 21, 715-722.
- Pearcy, R.W., Pfitsch, W.A., 1991. Influence of sunflecks on the δ13C of Adenocaulon bicolor plants occurring in contrasting forest understory microsites. Oecologia 86, 457-462.
- Reeds, P.J., 2000. Dispensable and indispensable amino acids for humans. J. Nutr. 130, 1835S-1840S.
- Rosnitschek-Schimmel, I., 1985. The influence of nitrogen nutrition on the accumulation of free amino acids in root tissue of Urtica dioica and their apical transport in xylem sap. Plant Cell Physiol. 26, 215-219.
- Schmidt, H.-L., 2003. Fundamentals and systematics of the non-statistical distribution of isotopes in natural compounds. Naturwissenschaften 90, 537- 552.
- Schmidt, H.-L., Gleixner, G., 1998. Carbon isotope effects on key reactions in plant metabolism and 13C-patterns in natural compounds. In: Griffiths, H. (Ed.), Stable Isotopes: Integration of Biological, Ecological and Geochemical Processes. BIOS Scientific Publishers, Oxford, pp. 13-25.
- Schmidt, H.-L., Robins, R.J., Werner, R.A., 2015. Multi-factorial in vivo stable isotope fractionation: causes, correlations, consequences and applications. Isotop. Environ. Health Stud. 51, 155-199.
- Scott, J.H., O'Brien, D.M., Emerson, D., Sun, H., McDonald, G.D., Salgado, A., Fogel, M. L., 2006. An examination of the carbon isotope effects associated with amino acid biosynthesis. Astrobiology 6, 867-880.
- Slocum, R.D., 2005. Genes, enzymes and regulation of arginine biosynthesis in plants. Plant Physiol. Biochem. 43, 729-745.
- Smith, B.N., Epstein, S., 1971. Two categories of 13C/12C ratios for higher plants. Plant Physiol. 47, 380-384.
- Smith, C.I., Fuller, B.T., Choy, K., Richards, M.P., 2009. A three-phase liquid chromatographic method for δ13C analysis of amino acids from biological protein hydrolysates using liquid chromatography-isotope ratio mass spectrometry. Anal. Biochem. 390, 165-172.
- Sultan, J.I., Inam-ur-Rahim, Yaqoob, M., Mustafa, M.I., Nawaz, H., Akhtar, P., 2009. Nutritional evaluation of herbs as fodder source for ruminants. Pak. J. Bot. 41, 2765-2776.
- Tcherkez, G., 2006. Viewpoint: how large is the carbon isotope fractionation of the photorespiratory enzyme glycine decarboxylase? Funct. Plant Biol. 33, 911- 920.
- Tcherkez, G., Mahe, A., Hodges, M., 2011. 12C/13C fractionations in plant primary metabolism. Trends Plant Sci. 16, 499-506.
- Wickman, F.E., 1952. Variations in the relative abundance of the carbon isotopes in plants. Geochim. Cosmochim. Acta 2, 243-254.