Published July 22, 2023
| Version v1
Journal article
Restricted
FISHing for Rickettsia in tardigrades: additional evidence for tardigrade endosymbionts
Authors/Creators
- 1. Interdepartmental Microbiology Program, Iowa State University, USA & Department of Animal Science, Iowa State University, USA
Description
Tibbs-Cortes, Bienvenido W., Schultz, Dylan L., Tibbs-Cortes and Stephan Schmitz-Esser, Laura E. (2024): FISHing for Rickettsia in tardigrades: additional evidence for tardigrade endosymbionts. Zoological Journal of the Linnean Society 200 (1): 230-238, DOI: 10.1093/zoolinnean/zlad081, URL: http://dx.doi.org/10.1093/zoolinnean/zlad081
Files
Linked records
Additional details
Identifiers
- LSID
- urn:lsid:plazi.org:pub:DF41C418E46EFFA3FF8E0B45E87EFFC0
Related works
- Cites
- Publication: 10.25431/11380_1178608 (DOI)
- Has part
- Figure: 10.5281/zenodo.10470508 (DOI)
- Figure: 10.5281/zenodo.10470510 (DOI)
- Figure: 10.5281/zenodo.10470512 (DOI)
References
- Amann RI, Binder BJ, Olson RJ et al. Combination of 16S rRNAtargeted oligonucleotide probes with flow cytometry for analysing mixed microbial populations. Applied and Environment Microbiology 1990;56:1919-25.
- Benoit TG, Locke J, Marks JR et al. Laboratory transmission of Xanthomonas campestris pv. raphani by a Tardigrade (Parachela = Macrobiotidae). The Florida Entomologist 2000;83:197-9.
- Boscaro V, Holt CC, Van Steenkiste NWL et al. Microbiomes of microscopicmarineinvertebratesdonotrevealsignaturesofphylosymbiosis. Nature Microbiology 2022;7:810-9.
- Brumin M, Kontsedalov S, Ghanim M. Rickettsia influences thermotolerance in the whitefly Bemisia tabaci B biotype. Insect Science 2011;18:57-66.
- Caspi-Fluger A, Inbar M, Mozes-Daube N et al. Horizontal transmission of the insect symbiont Rickettsia is plant-mediated. Proceedings Biological Sciences 2012;279:1791-6.
- Chrostek E, Pelz-Stelinski K, Hurst GDD et al. Horizontal transmission of intracellular insect symbionts via plants. Frontiers in Microbiology 2017;8:2237.
- Davis NM, Proctor DM, Holmes SP et al. Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data. Microbiome 2018;6:226.
- Daims H, Stoecker K,Wagner M. Fluorescence in situ hybridization for the detection of prokaryotes. In: Osborn AM, Smith CJ, (ed.), Advanced methods in molecular microbial ecology. Abingdon: Bios-Garland, 2005, 213-39.
- Davison HR, Pilgrim J, Wybouw N et al. Genomic diversity across the Rickettsia and 'Candidatus Megaira ' genera and proposal of genus status for the Torix group. Nature Communications 2022;13:2630.
- Degma P, Guideui R. Actual Checklist of Tardigrada Species, 42nd edn, 2023. hups://doi.org/10.25431/11380_1178608 (15 March 2023, date last accessed).
- Eisenhofer R, Minich JJ, Marotz C et al. Contamination in low microbial biomass microbiome studies: issues and recommendations. Trends in Microbiology 2019;27:105-17.
- Engel P, Moran NA. The gut microbiota of insects-diversity in structure and function. FEMS Microbiology Reviews 2013;37:699-735.
- Goulieb Y, Ghanim M, Chiel E et al. Identification and Localization of a Rickettsia sp. in Bemisia tabaci (Homoptera: Aleyrodidae). Applied and Environment Microbiology 2006;72:3646-52.
- Guideui R, Cesari M, Bertolani R et al. High diversity in species, reproductive modes and distribution within the Paramacrobiotus richtersi complex (Eutardigrada, Macrobiotidae). Zoological Letters 2019a;5:1.
- Guideui R, Vecchi M, Ferrari A et al. Further insights in the Tardigrada microbiome: phylogenetic position and prevalence of infection of four new Alphaproteobacteria putative endosymbionts. Zoological Journal of the Linnean Society 2019b;188:925-37.
- Hagimori T, Abe Y, Date S et al. The first finding of a Rickettsia bacterium associated with parthenogenesis induction among insects. Current Microbiology 2006;52:97-101.
- Kaczmarek L, Roszkowska M, Poprawa I et al. Integrative description of bisexual Paramacrobiotus experimentalis sp. nov. (Macrobiotidae) from republic of Madagascar (Africa) with microbiome analysis. Molecular Phylogenetics and Evolution 2020;145:106730.
- Karstens L, Asquith M, Davin S et al. Controlling for contaminants in low-biomass 16S rRNA gene sequencing experiments. mSystems 2019;4:e00290-19.
- Kliot A, Cilia M, Czosnek H et al. Implication of the bacterial endosymbiont Rickettsia spp. in interactions of the Whitefly Bemisia tabaci with Tomato yellow leaf curl virus. Journal of Virology 2014;88:5652-60.
- Krantz SL, Benoit TG, Beasley CW. Special issue on Tardigrada- Phytopathogenic bacteria associated with Tardigrada. Zoologischer Anzeiger 1999;238:259-60.
- Lemloh M-l, Brummer F, Schill RO. Life-history traits of the bisexual tardigrades Paramacrobiotus tonollii and Macrobiotus sapiens. Journal of Zoological Systematics and Evolutionary Research 2011;49:58-61.
- Lukasik P, Guo H, van Asch M et al. Protection against a fungal pathogen conferred by the aphid facultative endosymbionts Rickettsia and Spiroplasma is expressed in multiple host genotypes and species and is not influenced by co-infection with another symbiont. Journal of Evolutionary Biology 2013;26:2654-61.
- Manz W, Amann R, Ludwig W et al. Phylogenetic Oligodeoxynucleotide probes for the major subclasses of Proteobacteria: problems and solutions. Systematic and Applied Microbiology 1992;15:593-600.
- Massey JH, Newton ILG. Diversity and function of arthropod endosymbiont toxins. Trends in Microbiology 2022;30:185-98.
- McCutcheon JP, Boyd BM, Dale C. The life of an insect endosymbiont from the cradle to the grave. Current Biology 2019;29:R485-95.
- McGinn J, Lamason RL. The enigmatic biology of Rickettsiae: recent advances, open questions and outlook. Pathogens and Disease 2021;79:ssab019.
- Mioduchowska M, Nitkiewicz B, Roszkowska M et al. Taxonomic classification of the bacterial endosymbiont Wolbachia based on nextgeneration sequencing: is there molecular evidence for its presence in tardigrades? Genome 2021;64:951-8.
- Moran NA, McCutcheon JP, Nakabachi A. Genomics and evolution of heritable bacterial symbionts. Annual Review of Genetics 2008;42:165-90.
- Mushegian AA, Arbore R, Walser J-C et al. Environmental sources of bacteriaandgeneticvariationinbehaviorinfluencehost-associated microbiota.Applied and Environment Microbiology 2019;85:e01547-01518.
- Peroui MA, Clarke HK, Turner BD et al. Rickettsia as obligate and mycetomic bacteria. FASEB Journal 2006;20:2372-4.
- Pilgrim J, Siozios S, Baylis M et al. Tissue tropisms and transstadial transmission of a Rickettsia endosymbiont in the highland midge, Culicoides impunctatus (Diptera: Ceratopogonidae). Applied and Environment Microbiology 2020;86:e01492-01420.
- Portal-Celhay C, Blaser MJ. Competition and resilience between founder and introduced bacteria in the Caenorhabditis elegans Gut. Infection and Immunity 2012;80:1288-99.
- von der Schulenburg JH, Habig M, Sloggeu JJ et al. Incidence of male-killing Rickettsia spp. (a lpha-proteobacteria) in the ten-spot ladybird beetle Adalia decempunctata L. (Coleoptera: Coccinellidae). Applied and Environment Microbiology 2001;67:270-7.
- Socolovschi C, Parola P, Raoult D. 64 - tick-borne spoued fever rickeusioses. In: Magill AJ, Hill DR, Solomon T et al. (eds), Hunter's Tropical Medicine and Emerging Infectious Disease, 9th edn. London: W.B. Saunders, 2013, 546-52.
- Taylor M, Mediannikov O, Raoult D et al. Endosymbiotic bacteria associated with nematodes, ticks and amoebae. FEMS Immunology and Medical Microbiology 2012;64:21-31.
- Thongprem P, Davison HR, Thompson DJ et al. Incidence and diversity of Torix Rickettsia-Odonata Symbioses. Microbial Ecology 2021;81:203-12.
- Thongprem P, Evison SEF, Hurst GDD et al. Transmission, tropism, and biological impacts of Torix Rickettsia in the Common Bed Bug Cimex lectularius (Hemiptera: Cimicidae). Frontiers in Microbiology 2020;11:608763.
- Tibbs-Cortes LE, Tibbs-Cortes BW, Schmitz-Esser S. Tardigrade community microbiomes in North American orchards include putative endosymbionts and plant pathogens. Frontiers in Microbiology 2022;13:866930.
- Ursell LK, Metcalf JL, Parfrey LW et al. Defining the human microbiome. Nutrition Reviews 2012;70:S38-44.
- Vecchi M, Newton ILG, Cesari M et al. The microbial community of Tardigrades:environmentalinfluenceandspeciesspecificityofmicrobiome structure and composition.Microbial Ecology 2018;76:467-81.
- Yilmaz LS, Parnerkar S, Noguera DR. mathFISH, a web tool that uses thermodynamics-based mathematical models for in silico evaluation of oligonucleotide probes for fluorescence in situ hybridization. Applied and Environment Microbiology 2011;77:1118-22.
- Zawierucha K, Trzebny A, Buda J et al. Trophic and symbiotic links between obligate-glacier water bears (Tardigrada) and cryoconite microorganisms. PLoS One 2022;17:e0262039.
- Zhang F, Berg M, Dierking K et al. Caenorhabditis elegans as a model for microbiome research. Frontiers in Microbiology 2017;8:485.