Published August 25, 2023
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Figure 4 in Genomic diversity, evolutionary history, and species limits of the endemic Ethiopian laminate-toothed rats (genus Otomys, Rodentia: Muridae)
Authors/Creators
- 1. A.N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences, Moscow, Russia
- 2. Institute of Vertebrate Biology of the Czech Academy of Sciences, Brno, Czech Republic & Department of Biology and Institute of Mountain Research and Development, Mekelle University, Mekelle, Tigray, Ethiopia & Department of Wildlife, Fish, and Environmental Studies, Swedish University of Agricultural Sciences, Umeå, Sweden
- 3. A.N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences, Moscow, Russia & Institute of Vertebrate Biology of the Czech Academy of Sciences, Brno, Czech Republic & Department of Botany and Zoology, Faculty of Science, Masaryk University, Brno, Czech Republic
Description
Figure 4. The result of sNMF analysis based on 80% occupancy dataset, i.e. 3141 biallelic SNPs (one SNP per locus). Vertical bars show individual genotypes as composed of ancestral population gene pools, whose proportional contributions are indicated by coloured segments. Horizontal lines at the boưom delimit clusters defined by the dominant ancestral contributions. The associated labels identify clusters with named species or their geographically restricted populations (B. S. = Borena Saynt, D. S. = Debre Sina). Note that specimens from the populations in Borena Saynt and Aboye Gara, identified as O. simiensis by mtDNA and concatenated ddÞD data, cluster with O. cf. yaldeni from Ankober (purple cluster).
Notes
Published as part of Mizerovská, Daniela, Martynov, Aleksey A., Mikula, Ondřej, Bryjová, Anna, Meheretu, Yonas, Lavrenchenko, Leonid A. & Bryja, Josef, 2023, Genomic diversity, evolutionary history, and species limits of the endemic Ethiopian laminate-toothed rats (genus Otomys, Rodentia: Muridae), pp. 1059-1077 in Zoological Journal of the Linnean Society 199 (4) on page 1067, DOI: 10.1093/zoolinnean/zlad063, http://zenodo.org/record/10470258
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