A new species of Ninia (Serpentes, Colubridae) from western Ecuador and revalidation of N. schmidti
Authors/Creators
- 1. Khamai Foundation, Quito, Ecuador|Tropical Herping S.A., Quito, Ecuador
- 2. Liberty University, Lynchburg, United States of America
Description
We describe a new species of Ninia Baird & Girard, 1853 endemic to the cloud forests of northwestern Ecuador. The new species has previously been confused with N. atrata (Hallowell, 1845) and N. teresitae (Angarita-Sierra and Lynch 2017) but is genetically most closely related to a third species of Ninia endemic to the Chocoan–Tumbesian transition area of western Ecuador. We revalidate the name N. schmidti (Jan, 1862), designate a neotype, and provide a diagnosis of the taxon and a description of its hemipenial morphology based on new material. The new and revalidated species can easily be identified from one another and from other trans-Andean South American Ninia based on ventral and subcaudal scale counts, hemipenial morphology, and coloration of the supralabials, throat, and belly. Finally, we remove N. atrata from the herpetofaunal list of Ecuador.
Files
EvolSyst_article_112476.pdf
Files
(12.3 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:254d0433a80e63c44d1add996efe49e2
|
12.3 MB | Preview Download |
System files
(160.2 kB)
| Name | Size | Download all |
|---|---|---|
|
md5:e507b422888822f6c37775f6831d726a
|
160.2 kB | Download |
Linked records
Additional details
References
- Angarita-Sierra T (2009) Variación geográfica de Ninia atrata en Colombia (Colubridae: Dipsadinae). Papéis Avulsos de Zoologia 49: 277–288. https://doi.org/10.1590/S0031-10492009002200001
- Angarita-Sierra T (2014) Hemipenial morphology in the semifossorial snakes of the genus Ninia and a new species from Trinidad, West Indies (Serpentes: Dipsadidae). South American Journal of Herpetology 9: 114–130. https://doi.org/10.2994/SAJH-D-12-00004.1
- Angarita-Sierra T (2018) Range expansion in the geographic distribution of Ninia teresitae (Serpentes: Dipsadidae): new localities from northwestern Ecuador. Herpetology Notes 11: 357–360.
- Angarita-Sierra T, Lynch JD (2017) A new species of Ninia (Serpentes: Dipsadidae) from Chocó-Magdalena biogeographical province, western Colombia. Zootaxa 4244: 478–492. https://doi.org/10.11646/zootaxa.4244.4.2
- Arévalo E, Davis SK, Sites JW (1994) Mitochondrial DNA-sequence divergence and phylogenetic relationships among eight chromosome races of the Sceloporus grammicus complex (Phrynosomatidae) in Central Mexico. Systematic Biology 43: 387–418. https://doi.org/10.1093/sysbio/43.3.387
- Arteaga A, Pyron RA, Peñafiel N, Romero-Barreto P, Culebras J, Bustamante L, Yánez-Muñoz MH, Guayasamin JM (2016) Comparative phylogeography reveals cryptic diversity and repeated patterns of cladogenesis for amphibians and reptiles in northwestern Ecuador. PLoS ONE 11: e0151746. https://doi.org/10.1371/journal.pone.0151746
- Arteaga A, Salazar-Valenzuela D, Mebert K, Peñafiel N, Aguiar G, Sánchez-Nivicela JC, Pyron RA, Colston TJ, Cisneros-Heredia DF, Yánez-Muñoz MH, Venegas PJ, Guayasamin JM, Torres-Carvajal O (2018) Systematics of South American snail-eating snakes (Serpentes, Dipsadini), with the description of five new species from Ecuador and Peru. ZooKeys 766: 79–147. https://doi.org/10.3897/zookeys.766.24523
- Ayala-Varela F, Valverde S, Poe S, Narváez AE, Yánez-Muñoz MH, Torres-Carvajal O (2021) A new giant anole (Squamata: Iguanidae: Dactyloinae) from southwestern Ecuador. Zootaxa 4991: 295–317. https://doi.org/10.11646/zootaxa.4991.2.4
- Baird SF, Girard C (1853) Catalogue of North American reptiles in the Museum of the Smithsonian Institution. Part 1. Serpentes. Smithsonian Institute, Washington, 172 pp. https://doi.org/10.5962/bhl.title.5513
- Barlow A, Pook CE, Harrison RA, Wüster W (2009) Coevolution of diet and prey-specific venom activity supports the role of selection in snake venom evolution. Proceedings of the Royal Society B: Biological Sciences 276: 2443–2449. https://doi.org/10.1098/rspb.2009.0048
- Beaupre SJ, Jacobson ER, Lillywhite HB, Zamudio K (2004) Guidelines for use of live amphibians and reptiles in field and laboratory research. American Society of Ichthyologists and Herpetologists, Lawrence, 43 pp.
- Beolens B, Watkins M, Grayson M (2011) The eponym dictionary of reptiles. Johns Hopkins University Press, Baltimore, 296 pp. https://doi.org/10.1353/book.1869
- Betancourt R, Reyes-Puig C, Lobos SE, Yánez-Muñoz MH, Torres-Carvajal O (2018) Sistemática de los saurios Anadia Gray, 1845 (Squamata: Gymnophthalmidae) de Ecuador: límite de especies, distribución geográfica y descripción de una especie nueva. Neotropical Biodiversity 4: 82–101. https://doi.org/10.1080/23766808.2018.1487694
- Burbrink FT, Lawson R, Slowinski JB (2000) Mitochondrial DNA phylogeography of the polytypic North American rat snake (Elaphe obsoleta): A critique of the subspecies concept. Evolution 54(6): 2107–2188. https://doi.org/10.1111/j.0014-3820.2000.tb01253.x
- Burbrink FT, Crother BI, Murra CM, Smith BT, Ruane S, Myers EA, Pyron RA (2022) Empirical and philosophical problems with the subspecies rank. Ecology and Evolution 12: e9069. https://doi.org/10.1002/ece3.9069
- Burger WL, Werler JE (1954) The subspecies of the ring-necked coffee snake Ninia diademata, and a short biological and taxonomic account of the genus. The University of Kansas Science Bulletin 36: 643–672.
- Camper JD, Torres-Carvajal O, Ron SR, Nilsson J, Arteaga A, Knowles TW, Arbogast BS (2021) Amphibians and reptiles of Wildsumaco Wildlife Sanctuary, Napo Province, Ecuador. Check List 17: 729–751. https://doi.org/10.15560/17.3.729
- Carstens BC, Pelletier TA, Reid NM, Satler JD (2013) How to fail at species delimitation. Molecular Ecology 22: 4369–4383. https://doi.org/10.1111/mec.12413
- de Queiroz K (2007) Species concepts and species delimitation. Systematic Biology 56: 879–886. https://doi.org/10.1080/10635150701701083
- Dowling HG (1951) A proposed standard system of counting ventrals in snakes. British Journal of Herpetology 1: 97–99.
- Dowling HG, Savage JM (1960) A guide to the snake hemipenis: a survey of basic structure and systematic characteristics. Zoologica 45: 17–28. https://doi.org/10.5962/p.203350
- Drummond AJ, Ashton B, Buxton S, Cheung M, Cooper A, Heled J, Kearse M, Moir R, Stones-Havas S, Sturrock S, Thierer T, Wilson A (2021) Geneious version 2021.1. https://www.geneious.com
- Duméril AMC, Bibron G, Duméril AHA (1854) Erpétologie générale ou Histoire Naturelle complète des Reptiles. Librairie Encyclopédique de Roret, Paris, 780 pp. https://doi.org/10.5962/bhl.title.45973
- Dunn ER (1935) The snakes of the genus Ninia. Proceedings of the National Academy of Science of the United States of America 21: 9–12. https://doi.org/10.1073/pnas.21.1.9
- Elith J, Leathwick JR (2009) Species distribution models: ecological explanation and prediction across space and time. Annual Review of Ecology, Evolution, and Systematics 40: 677–697. https://doi.org/10.1146/annurev.ecolsys.110308.120159
- Elith J, Phillips SJ, Hastie T, Dudík M, Chee YE, Yates CJ (2011) A statistical explanation of MaxEnt for ecologists. Diversity and Distributions 17: 43–57. https://doi.org/10.1111/j.1472-4642.2010.00725.x
- Felsenstein J (2004) Inferring phylogenies. Sinauer Associates, Sunderland, 664 pp.
- Guayasamin JM, Cisneros-Heredia DF, Vieira J, Kohn S, Gavilanes G, Lynch RL, Hamilton PS, Maynard RJ (2019) A new glassfrog (Centrolenidae) from the Chocó-Andean Río Manduriacu Reserve, Ecuador, endangered by mining. PeerJ 7: e6400. https://doi.org/10.7717/peerj.6400
- Guerra-Correa E (2020) Ninia teresitae. In: Torres-Carvajal O, Pazmiño-Otamendi G, Salazar-Valenzuela D (Eds) Reptiles del Ecuador. Version 2022.0. Museo de Zoología, Pontificia Universidad Católica del Ecuador. [accessed on 2023-09-09]
- Hallowell E (1845) Descriptions of reptiles from South America, supposed to be new. Proceedings of the Academy of Natural Sciences of Philadelphia 2: 241–247.
- Hijmans RJ, Cameron SE, Parra JL, Jones PG, Jarvis A (2005) Very high resolution interpolated climate surfaces for global land areas. International Journal of Climatology 25: 1965–1978. https://doi.org/10.1002/joc.1276
- Ingrasci MJ (2011) Molecular systematic of the Coffee snakes, genus Ninia (Colubridae: Dipsadinae). MSc Thesis, University of Texas at Arlington, 127 pp.
- IUCN (2012) IUCN Red List categories and criteria: Version 3.1. Second edition. IUCN Species Survival Commission, Gland and Cambridge, 32 pp.
- Jan G (1862) Enumerazione sistematico delle specie d'ofidi del gruppo Calamaridae. Archive per la Zoologia, l'Anatomia et la Fisiologia 2: 1–76.
- Katoh K, Standley DM (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30: 772–780. https://doi.org/10.1093/molbev/mst010
- Lanfear R, Frandsen PB, Wright AM, Senfeld T, Calcott B (2016) PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Molecular Biology and Evolution 34: 772–773. https://doi.org/10.1093/molbev/msw260
- MAE (2012) Línea base de deforestación del Ecuador continental. Ministerio del Ambiente del Ecuador, Quito, 30 pp.
- MECN (2010) Serie herpetofauna del Ecuador: El Chocó esmeraldeño. Museo Ecuatoriano de Ciencias Naturales, Quito, 232 pp.
- Myers CW, McDowell SB (2014) New taxa and cryptic species of neotropical snakes (Xenodontinae), with commentary on hemipenes as generic and specific characters. Bulletin of the American Museum of Natural History 385: 1–112. https://doi.org/10.1206/862.1
- Padial JM, Miralles A, de la Riva I, Vences M (2010) The integrative future of taxonomy. Frontiers in Zoology 7: 16. https://doi.org/10.1186/1742-9994-7-16
- Palumbi SR, Martin A, Romano S, McMillan WO, Stice L, Grabowski G (1991) The simple fool's guide to PCR, version 2.0. University of Hawaii, Honolulu, 94 pp.
- Parker HW (1940) Undescribed anatomical structures and new species of reptiles and amphibians. Annals and Magazine of Natural History 5: 257–274. https://doi.org/10.1080/00222934008527045
- Peñafiel N, Flores DM, Rivero De Aguilar J, Guayasamin JM, Bonaccorso E (2020) A cost-effective protocol for total DNA isolation from animal tissue. Neotropical Biodiversity 5: 69–74. https://doi.org/10.1080/23766808.2019.1706387
- Phillips SJ, Anderson RP, Schapire RE (2006) Maximum entropy modeling of species geographic distributions. Ecological Modelling 190: 231–259. https://doi.org/10.1016/j.ecolmodel.2005.03.026
- Pesantes OS (1994) A method for preparing hemipenis of preserved snakes. Journal of Herpetology 28: 93–95. https://doi.org/10.2307/1564686
- Peterson AT, Soberon JR, Pearson RG, Anderson RP, Martínez‐Meyer E, Nakamura M, Bastos Araújo M (2011) Ecological niches and geographic distributions. Princeton University Press, Princeton, 328 pp. https://doi.org/10.23943/princeton/9780691136868.003.0003
- Rambaut A, Suchard M, Drummond AJ (2022) Tracer version 1.7.1. http://www.beast.community
- Renner IW, Warton DI (2013) Equivalence of MAXENT and poisson point process models for species distribution modeling in ecology. Biometrics 69: 274–281. https://doi.org/10.1111/j.1541-0420.2012.01824.x [PMID: 23379623]
- Ronquist F, Huelsenbeck JP (2013) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572–1574. https://doi.org/10.1093/bioinformatics/btg180
- Royle JA, Chandler RB, Yackulic C, Nichols JD (2012) Likelihood analysis of species occurrence probability from presence-only data for modelling species distributions. Methods in Ecology and Evolution 3: 545–554. https://doi.org/10.1111/j.2041-210X.2011.00182.x
- Soberón J, Peterson TA (2005) Interpretation of models of fundamental ecological niches and species' distributional areas. Biodiversity Informatics 2: 1–10. https://doi.org/10.17161/bi.v2i0.4
- Torres-Carvajal O, Almendáriz A, Valencia J, Yánez-Muñoz M, Reyes JP (2008) A new species of Enyalioides (Iguanidae: Hoplocercinae) from southwestern Ecuador. Papéis Avulsos de Zoologia 48: 227–235. https://doi.org/10.1590/S0031-10492008002000001
- Zaher H (1999) Hemipenial morphology of the South American xenodontine snakes, with a proposal for a monophyletic Xenodontinae and a reappraisal of Colubroid hemipenis. Bulletin of the American Museum of Natural History 240: 1–168.