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Published November 1, 2017 | Version v1.18.2
Software Open

broadinstitute/viral-ngs: v1.18.2

  • 1. Broad Institute
  • 2. Broad Institute of MIT and Harvard
  • 3. MIT
  • 4. @broadinstitute
  • 5. DNAnexus
  • 6. Aalborg University Hospital

Description

Changed:

  • Demultiplexing from Illumina basecalls is now more permissive of varying input directory
  • [dev-related] conda package and Docker image are now built on each branch commit

Fixed:

  • [dev-related] package and docker build now optimized for more rapid built+test
  • --notemp added to Snakemake call script to support usage of --immediate-submit as required by newer Snakemake versions
  • Snakemake pipeline demux fixed
  • -l h_rt=hh:mm:ss spec now consistently using =

Files

broadinstitute/viral-ngs-v1.18.2.zip

Files (7.4 MB)

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Additional details